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PMID: 23940263 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

The i5K Initiative: advancing arthropod genomics for knowledge, human health, agriculture, and the environment.

The Journal of heredity ·Vol. 104 ·No. 5 ·2013-00-00 ·Pages 595-600

i5K Consortium

Abstract

Insects and their arthropod relatives including mites, spiders, and crustaceans play major roles in the world's terrestrial, aquatic, and marine ecosystems. Arthropods compete with humans for food and transmit devastating diseases. They also comprise the most diverse and successful branch of metazoan evolution, with millions of extant species. Here, we describe an international effort to guide arthropod genomic efforts, from species prioritization to methodology and informatics. The 5000 arthropod genomes initiative (i5K) community met formally in 2012 to discuss a roadmap for sequencing and analyzing 5000 high-priority arthropods and is continuing this effort via pilot projects, the development of standard operating procedures, and training of students and career scientists. With university, governmental, and industry support, the i5K Consortium aspires to deliver sequences and analytical tools for each of the arthropod branches and each of the species having beneficial and negative effects on humankind.

Keywords
agriculture comparative genomics disease vector genome sequencing insect evolution
MeSH Terms
Animals Arthropods/genetics Chromosome Mapping Genomics
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
i5K Consortium
Investigators
27 investigators, click to expand
Evans Jay D
Brown Susan J
Hackett Kevin J
Robinson Gene
Richards Stephen
Lawson Daniel
Elsik Christine
Coddington Jonathan
Edwards Owain
Emrich Scott
Gabaldon Toni
Goldsmith Marian
Hanes Glenn
Misof Bernard
Muñoz-Torres Monica
Niehuis Oliver
Papanicolaou Alexie
Pfrender Michael
Poelchau Monica
Purcell-Miramontes Mary
Robertson Hugh M
Ryder Oliver
Tagu Denis
Torres Tatiana
Zdobnov Evgeny
Zhang Guojie
Zhou Xin
References (3)
3 references, click to expand
  1. The genome sequence of Drosophila melanogaster.
    Science. 2000 Mar 24;287(5461):2185-95 PMID: 10731132
  2. Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species.
    J Hered. 2009 Nov-Dec;100(6):659-74 PMID: 19892720
  3. The genome of Tetranychus urticae reveals herbivorous pest adaptations.
    Nature. 2011 Nov 23;479(7374):487-92 PMID: 22113690
Article Info
Journal
The Journal of heredity
Abbr.
J Hered
ISSN
1465-7333
Published
2013-00-00
Pages
595-600
Language
English
Region
United States
NLM ID
0375373
PMCID
PMC4046820
Subset
IM
Grants
NHGRI NIH HHS · U54 HG003273 · United States
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