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PMID: 2468367 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Statistical discrimination of fractal and Markov models of single-channel gating.

Biophysical journal ·Vol. 54 ·No. 5 ·1988-11-00 ·Pages 871-7

Korn SJ, Horn R

Abstract

A statistical comparison is presented of Markov and fractal models of ion channel gating. The analysis is based on single-channel data from two types of ion channels: open times from a 90 pS Ca-activated K channel from GH3 pituitary cells, and closed times from a nonselective channel from rabbit corneal endothelium (Liebovitch et al., 1987a). Maximum likelihood methods were used to fit the data. For both data sets the best Markov model had three exponential components. The best Markov model had a higher likelihood than the fractal model, and the Asymptotic Information Criterion favored the Markov model for each data set. A more detailed analysis, using the Monte Carlo methods described in Horn (1987), showed that the Markov model was not significantly better than the fractal model for the corneal endothelium channels. The inability to discriminate the models definitively in this case was shown to be due in part to the small size of the data set.

MeSH Terms
Animals Calcium/pharmacology Cell Line Cornea/physiology Endothelium/physiology Ion Channels/physiology Mathematics Models, Biological Pituitary Neoplasms Potassium Channels/drug effects,physiology
Chemicals
Ion Channels Potassium Channels Calcium
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Korn S J
Neurosciences Department, Roche Institute of Molecular Biology, Nutley, New Jersey 07110.
Horn R
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19 references, click to expand
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Article Info
Journal
Biophysical journal
Abbr.
Biophys J
ISSN
0006-3495
Published
1988-11-00
Pages
871-7
Language
English
Region
United States
NLM ID
0370626
PMCID
PMC1330395
Subset
IM
Grants
NINDS NIH HHS · NS08117 · United States
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