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PMID: 2477366 Published · ppublish English Comparative Study Journal Article Research Support, U.S. Gov't, P.H.S.

Interferons as gene activators. Indications for repeated gene duplication during the evolution of a cluster of interferon-activatable genes on murine chromosome 1.

The Journal of biological chemistry ·Vol. 264 ·No. 29 ·1989-10-15 ·Pages 17182-9

Choubey D, Snoddy J, Chaturvedi V, Toniato E, Opdenakker G, Thakur A, Samanta H, Engel DA, Lengyel P

Abstract

We have described earlier a gene cluster, including at least six interferon-activatable genes closely linked to the erythroid alpha spectrin locus and the serum amyloid P-component locus on murine chromosome 1. Here, we report that sequences of three genes from the cluster (the 201, 202, and 204 genes) are very similar in a segment extending from at least 550 nucleotides upstream of the 3' end of the transcription initiation region to beyond the first exon intron border (96% similarity between the 202 and 204 genes and 89% similarity between the 201 and 204 genes). This region contains the following two types of interferon-responsive enhancers: a GA box and a Friedman Stark sequence. The proteins coded for by the 202 gene (51 kDa) and the 204 gene (72 kDa) are hydrophilic. The amino acids have been conserved in the two proteins in 47% of the sequence. Each protein includes two apparently contiguous, approximately 200-amino acid long segments with much sequence similarity (27% in the 202 protein and 34% in the 204 protein). These segments are preceded in the 204 protein only by a segment including four perfect and three imperfect repeats of a 7 amino acid sequence. These and other data suggest that the evolution of the gene cluster involved the duplication of a DNA segment generating a double length transcription unit and subsequent divergence and duplication of this unit giving rise to at least two interferon-activatable genes (the 202 and 204 genes).

MeSH Terms
Amino Acid Sequence Animals Base Sequence Codon DNA/genetics Enhancer Elements, Genetic/physiology Gene Expression Regulation/physiology Interferons/pharmacology Mice Molecular Sequence Data Repetitive Sequences, Nucleic Acid Serum Amyloid P-Component/genetics Spectrin/genetics
Chemicals
Codon Serum Amyloid P-Component Spectrin DNA Interferons
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Choubey D
Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06511.
Snoddy J
Chaturvedi V
Toniato E
Opdenakker G
Thakur A
Samanta H
Engel D A
Lengyel P
Article Info
Journal
The Journal of biological chemistry
Abbr.
J Biol Chem
ISSN
0021-9258
Published
1989-10-15
Pages
17182-9
Language
English
Region
United States
NLM ID
2985121R
Subset
IM
Grants
NIAID NIH HHS · AI12320 · United States
NCI NIH HHS · CA16038 · United States
Databases
GENBANK
J05054, J05055, M31418, M31419, M31420, M31421, M31422
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