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PMID: 24968835 Published · ppublish chi Journal Article Research Support, Non-U.S. Gov't

[Differentially expressed genes and potential signaling pathway in Asian people with breast cancer by preliminary analysis of a large sample of the microarray data].

Nan fang yi ke da xue xue bao = Journal of Southern Medical University ·Vol. 34 ·No. 6 ·2014-06-00 ·页码 807-12

Chen L, Ye C, Huang Z, Li X, Yao G, Liu M, Hu X, Dong J, Guo Z

Abstract

To screen differentially expressed genes and identify potential signaling pathway in Asian people with breast cancer. Five gene microarray datasets of Asian people with breast cancer, GSE6367, GSE9309, GSE15852, GSE33447 and GSE45255, were downloaded from GEO. Microarrays with 318 breast cancer and 60 normal breast tissues were used for analysis of differentially expressed genes and pathway. 32 pairs of breast cancer patients' specimens were used to validate the differentially expressed genes by real-time PCR. Analysis of the large sample of microarray data identified 436 differentially expressed genes in breast cancer tissues, while 259 of these genes were up-regulated and the other 177 down-regulated. Pathway analysis showed that metabolism-related signaling pathway may be involved in the development of breast cancer in Asian people. The expressions of KRT19, ADIPOQ, CFD, RBP4, LPL, ABCA8 and CD36 genes were confirmed by real-time PCR. This study shows differential gene expression profile and potential signaling pathway in Asian people with breast cancer. CD36 gene may be closely related to the Asian breast cancer. ABCA8 gene may be a new disease gene in Asian breast cancer.

MeSH 主题词
Asians Breast Neoplasms/genetics Female Gene Expression Profiling Gene Expression Regulation, Neoplastic Humans Oligonucleotide Array Sequence Analysis Real-Time Polymerase Chain Reaction Signal Transduction Transcriptome
作者与单位
共 9 位作者,点击展开单位 / ORCID
Chen Lujia
Department of Breast Medical Oncology, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.E-mail: [email protected].
Ye Changsheng
Huang Zhongxi
Li Xin
Yao Guangyu
Liu Minfeng
Hu Xiaolei
Dong Jianyu
Guo Zhaoze
Article Info
Journal
Nan fang yi ke da xue xue bao = Journal of Southern Medical University
Abbr.
Nan Fang Yi Ke Da Xue Xue Bao
ISSN
1673-4254
Corresponding email
Published
2014-06-00
页码
807-12
Language
chi
Country/Region
China
NLM ID
101266132
External Links
PubMed source
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