Home LiteratureArticle Details
PMID: 25363629 Published · ppublish English Journal Article Meta-Analysis Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

An alternative pseudolikelihood method for multivariate random-effects meta-analysis.

Statistics in medicine ·Vol. 34 ·No. 3 ·2015-02-10 ·Pages 361-80

Chen Y, Hong C, Riley RD

Abstract

Recently, multivariate random-effects meta-analysis models have received a great deal of attention, despite its greater complexity compared to univariate meta-analyses. One of its advantages is its ability to account for the within-study and between-study correlations. However, the standard inference procedures, such as the maximum likelihood or maximum restricted likelihood inference, require the within-study correlations, which are usually unavailable. In addition, the standard inference procedures suffer from the problem of singular estimated covariance matrix. In this paper, we propose a pseudolikelihood method to overcome the aforementioned problems. The pseudolikelihood method does not require within-study correlations and is not prone to singular covariance matrix problem. In addition, it can properly estimate the covariance between pooled estimates for different outcomes, which enables valid inference on functions of pooled estimates, and can be applied to meta-analysis where some studies have outcomes missing completely at random. Simulation studies show that the pseudolikelihood method provides unbiased estimates for functions of pooled estimates, well-estimated standard errors, and confidence intervals with good coverage probability. Furthermore, the pseudolikelihood method is found to maintain high relative efficiency compared to that of the standard inferences with known within-study correlations. We illustrate the proposed method through three meta-analyses for comparison of prostate cancer treatment, for the association between paraoxonase 1 activities and coronary heart disease, and for the association between homocysteine level and coronary heart disease.

Keywords
composite likelihood correlation multivariate meta-analysis pseudolikelihood singular estimated covariance matrix problem
MeSH Terms
Aryldialkylphosphatase/therapeutic use Computer Simulation Coronary Disease/blood,drug therapy,genetics Homocysteine/blood Humans Likelihood Functions Male Methylenetetrahydrofolate Reductase (NADPH2)/genetics Models, Statistical Multivariate Analysis Prostatic Neoplasms/therapy
Chemicals
Homocysteine Methylenetetrahydrofolate Reductase (NADPH2) Aryldialkylphosphatase
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Chen Yong
Division of Biostatistics, University of Texas School of Public Health, 1200 Pressler St, Houston, Texas 77030, U.S.A.
Hong Chuan
Riley Richard D
References (29)
29 references, click to expand
  1. Meta-analysis in clinical trials.
    Control Clin Trials. 1986 Sep;7(3):177-88 PMID: 3802833
  2. Meta-analyses based on abstracted data: a step in the right direction, but only a first step.
    J Clin Oncol. 2004 Oct 1;22(19):3839-41 PMID: 15326196
  3. Multiple-outcomes meta-analysis of treatments for periodontal disease.
    J Dent Res. 1995 Apr;74(4):1030-9 PMID: 7782533
  4. Antioxidants and atherosclerotic heart disease.
    N Engl J Med. 1997 Aug 7;337(6):408-16 PMID: 9241131
  5. Meta-analysis for the evaluation of potential surrogate markers.
    Stat Med. 1997 Sep 15;16(17):1965-82 PMID: 9304767
  6. Extracting summary statistics to perform meta-analyses of the published literature for survival endpoints.
    Stat Med. 1998 Dec 30;17(24):2815-34 PMID: 9921604
  7. Investigating heterogeneity in an individual patient data meta-analysis of time to event outcomes.
    Stat Med. 2005 May 15;24(9):1307-19 PMID: 15685717
  8. Meta-analysis of genetic studies using Mendelian randomization--a multivariate approach.
    Stat Med. 2005 Jul 30;24(14):2241-54 PMID: 15887296
  9. An evaluation of bivariate random-effects meta-analysis for the joint synthesis of two correlated outcomes.
    Stat Med. 2007 Jan 15;26(1):78-97 PMID: 16526010
  10. Bivariate random-effects meta-analysis and the estimation of between-study correlation.
    BMC Med Res Methodol. 2007;7:3 PMID: 17222330
  11. An alternative model for bivariate random-effects meta-analysis when the within-study correlations are unknown.
    Biostatistics. 2008 Jan;9(1):172-86 PMID: 17626226
  12. International epidemiology of prostate cancer: geographical distribution and secular trends.
    Mol Nutr Food Res. 2009 Feb;53(2):171-84 PMID: 19101947
  13. Meta-analysis of individual patient data versus aggregate data from longitudinal clinical trials.
    Clin Trials. 2009 Feb;6(1):16-27 PMID: 19254930
  14. Meta-analysis of individual participant data: rationale, conduct, and reporting.
    BMJ. 2010;340:c221 PMID: 20139215
  15. Evaluating diagnostic tests: The area under the ROC curve and the balance of errors.
    Stat Med. 2010 Jun 30;29(14):1502-10 PMID: 20087877
  16. [Meta-analysis based on individual patient data: example of advanced colorectal cancer].
    Rech Soins Infirm. 2010 Jun;(101):25-8 PMID: 20608262
  17. HER2 and TOP2A as predictive markers for anthracycline-containing chemotherapy regimens as adjuvant treatment of breast cancer: a meta-analysis of individual patient data.
    Lancet Oncol. 2011 Nov;12(12):1134-42 PMID: 21917518
  18. Association between PON1 activity and coronary heart disease risk: a meta-analysis based on 43 studies.
    Mol Genet Metab. 2012 Jan;105(1):141-8 PMID: 22030099
  19. Androgenic suppression combined with radiotherapy for the treatment of prostate adenocarcinoma: a systematic review.
    BMC Cancer. 2012;12:54 PMID: 22299707
  20. Estimating within-study covariances in multivariate meta-analysis with multiple outcomes.
    Stat Med. 2013 Mar 30;32(7):1191-205 PMID: 23208849
  21. Multivariate meta-analysis: potential and promise.
    Stat Med. 2011 Sep 10;30(20):2481-98 PMID: 21268052
  22. Trim and fill: A simple funnel-plot-based method of testing and adjusting for publication bias in meta-analysis.
    Biometrics. 2000 Jun;56(2):455-63 PMID: 10877304
  23. A multilevel model framework for meta-analysis of clinical trials with binary outcomes.
    Stat Med. 2000 Dec 30;19(24):3417-32 PMID: 11122505
  24. Systematic reviews in health care: Investigating and dealing with publication and other biases in meta-analysis.
    BMJ. 2001 Jul 14;323(7304):101-5 PMID: 11451790
  25. Meta-analysis of continuous outcome data from individual patients.
    Stat Med. 2001 Aug 15;20(15):2219-41 PMID: 11468761
  26. Advanced methods in meta-analysis: multivariate approach and meta-regression.
    Stat Med. 2002 Feb 28;21(4):589-624 PMID: 11836738
  27. Multivariate meta-analysis.
    Stat Med. 2003 Jul 30;22(14):2309-33 PMID: 12854095
  28. Paraoxonase, a cardioprotective enzyme: continuing issues.
    Curr Opin Lipidol. 2004 Jun;15(3):261-7 PMID: 15166781
  29. Cox regression analysis of multivariate failure time data: the marginal approach.
    Stat Med. 1994 Nov 15;13(21):2233-47 PMID: 7846422
Article Info
Journal
Statistics in medicine
Abbr.
Stat Med
ISSN
1097-0258
Published
2015-02-10
Epub
2014-00-03
Pages
361-80
Language
English
Region
England
NLM ID
8215016
PMCID
PMC4305202
Subset
IM
Grants
Medical Research Council · MR/J013595/1 · United Kingdom
AHRQ HHS · R03 HS022900 · United States
AHRQ HHS · R03HS022900 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]