Home LiteratureArticle Details
PMID: 2549005 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Genes downstream from pucB and pucA are essential for formation of the B800-850 complex of Rhodobacter capsulatus.

Journal of bacteriology ·Vol. 171 ·No. 9 ·1989-09-00 ·Pages 4914-22

Tichy HV, Oberlé B, Stiehle H, Schiltz E, Drews G

Abstract

The formation of the light-harvesting complex B800-850 (LH-II) of Rhodobacter capsulatus requires, in addition to the synthesis of the polypeptides alpha and beta (the gene products of pucA and pucB), the synthesis of bacteriochlorophyll and carotenoids and the expression of at least one gene localized downstream from the pucBA operon. This was concluded from the observation that a Tn5 insertion downstream from pucBA inhibited the formation of the LH-II complex and the formation of the pucBA mRNA. The Tn5 insertion point was mapped and found to be over 500 base pairs (bp) downstream from the end of the pucA gene, suggesting the presence of additional puc genes. A region of about 3,000 bp including the pucB and pucA genes and DNA downstream from pucA was sequenced and found to contain three open reading frames (ORFs C, D, and E). The polypeptide deduced from the first ORF (C) contains 403 amino acids with strongly hydrophobic stretches and one large and three small hydrophilic domains carrying many charged residues. The other two ORFs contain 113 (D) and 118 (E) codons. The amino acid sequences of the N terminus and two tryptic peptides of an alkaline-soluble Mr-14,000 subunit of the isolated LH-II complex were identical with the deduced amino acid sequence of ORF E.

MeSH Terms
Amino Acid Sequence Bacterial Proteins/genetics Base Sequence DNA, Bacterial/genetics Escherichia coli/genetics Genes Genes, Bacterial Genetic Complementation Test Light-Harvesting Protein Complexes Molecular Sequence Data Oligonucleotide Probes Operon Photosynthetic Reaction Center Complex Proteins Plasmids Protein Conformation Restriction Mapping Rhodopseudomonas/genetics
Chemicals
Bacterial Proteins DNA, Bacterial Light-Harvesting Protein Complexes Oligonucleotide Probes Photosynthetic Reaction Center Complex Proteins
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Tichy H V
Institut für Biologie II, Universität Freiburg, Federal Republic of Germany.
Oberlé B
Stiehle H
Schiltz E
Drews G
References (37)
37 references, click to expand
  1. An improved filamentous helper phage for generating single-stranded plasmid DNA.
    Gene. 1986;45(3):333-8 PMID: 3026919
  2. An intercistronic stem-loop structure functions as an mRNA decay terminator necessary but insufficient for puf mRNA stability.
    Cell. 1988 Feb 26;52(4):609-19 PMID: 2449287
  3. R-prime site-directed transposon Tn7 mutagenesis of the photosynthetic apparatus in Rhodopseudomonas capsulata.
    J Mol Biol. 1982 Nov 25;162(1):17-41 PMID: 6296403
  4. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  5. The complete amino-acid sequence of the large bacteriochlorophyll-binding polypeptide from light-harvesting complex II (B800-850) of Rhodopseudomonas capsulata.
    Eur J Biochem. 1983 Jan 1;129(3):533-6 PMID: 6825670
  6. Genetic-physical mapping of a photosynthetic gene cluster from R. capsulata.
    Cell. 1984 Jul;37(3):937-47 PMID: 6086150
  7. Formation of reaction centers and light-harvesting bacteriochlorophyll-protein complexes in Rhodopseudomonas capsulata.
    Arch Microbiol. 1975 Jun 20;104(1):77-82 PMID: 1156096
  8. A simple method for displaying the hydropathic character of a protein.
    J Mol Biol. 1982 May 5;157(1):105-32 PMID: 7108955
  9. Isolation and characterization of the polypeptide components from light-harvesting pigment-protein complex B800--850 of Rhodopseudomonas capsulata.
    Eur J Biochem. 1980 Oct;111(2):455-60 PMID: 7460908
  10. Simplified computer programs for search of homology within nucleotide sequences.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):193-201 PMID: 6546417
  11. Isolation and characterization of light harvesting bacteriochlorophyll.protein complexes from Rhodopseudomonas capsulata.
    Biochim Biophys Acta. 1978 Mar 13;501(3):499-513 PMID: 629962
  12. Nucleotide and deduced polypeptide sequences of the photosynthetic reaction-center, B870 antenna, and flanking polypeptides from R. capsulata.
    Cell. 1984 Jul;37(3):949-57 PMID: 6744416
  13. New expression vectors for identifying and testing signal structures for initiation and termination of transcription.
    Methods Enzymol. 1987;153:452-61 PMID: 2828846
  14. Effects of light, oxygen, and substrates on steady-state levels of mRNA coding for ribulose-1,5-bisphosphate carboxylase and light-harvesting and reaction center polypeptides in Rhodopseudomonas sphaeroides.
    J Bacteriol. 1985 Jun;162(3):925-32 PMID: 2581935
  15. A rapid boiling method for the preparation of bacterial plasmids.
    Anal Biochem. 1981 Jun;114(1):193-7 PMID: 6269464
  16. Light-harvesting II (B800-B850 complex) structural genes from Rhodopseudomonas capsulata.
    Proc Natl Acad Sci U S A. 1985 Jan;82(1):58-62 PMID: 16593533
  17. New M13 vectors for cloning.
    Methods Enzymol. 1983;101:20-78 PMID: 6310323
  18. Oxygen-regulated mRNAs for light-harvesting and reaction center complexes and for bacteriochlorophyll and carotenoid biosynthesis in Rhodobacter capsulatus during the shift from anaerobic to aerobic growth.
    J Bacteriol. 1986 Dec;168(3):1180-8 PMID: 2430948
  19. Nucleotide sequence of the btuCED genes involved in vitamin B12 transport in Escherichia coli and homology with components of periplasmic-binding-protein-dependent transport systems.
    J Bacteriol. 1986 Sep;167(3):928-34 PMID: 3528129
  20. Effects of light intensity on membrane differentiation in Rhodopseudomonas capsulata.
    Biochim Biophys Acta. 1979 Sep 11;547(3):417-28 PMID: 486432
  21. Regulation of the regulatory gene for the arabinose pathway, araC.
    J Mol Biol. 1976 Jul 5;104(3):557-66 PMID: 781294
  22. Regulation of expression of genes for light-harvesting antenna proteins LH-I and LH-II; reaction center polypeptides RC-L, RC-M, and RC-H; and enzymes of bacteriochlorophyll and carotenoid biosynthesis in Rhodobacter capsulatus by light and oxygen.
    Proc Natl Acad Sci U S A. 1986 Oct;83(20):7613-7 PMID: 3532117
  23. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  24. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.
    Gene. 1984 Jun;28(3):351-9 PMID: 6235151
  25. The polypeptide components from light-harvesting pigment-protein complex II (B800-850) of Rhodopseudomonas capsulata. Solubilization, purification and sequence studies.
    Eur J Biochem. 1982 Oct;127(2):315-8 PMID: 7140771
  26. Gene expression of pigment-binding proteins of the bacterial photosynthetic apparatus: Transcription and assembly in the membrane of Rhodopseudomonas capsulata.
    Proc Natl Acad Sci U S A. 1985 Oct;82(19):6485-9 PMID: 16593609
  27. Chromosomal deletion and plasmid complementation of the photosynthetic reaction center and light-harvesting genes from Rhodopseudomonas capsulata.
    Gene. 1985;38(1-3):19-30 PMID: 3864717
  28. Posttranscriptional regulation by light of the steady-state levels of mature B800-850 light-harvesting complexes in Rhodobacter capsulatus.
    J Bacteriol. 1988 Feb;170(2):877-82 PMID: 2448296
  29. Nucleotide sequences of the fecBCDE genes and locations of the proteins suggest a periplasmic-binding-protein-dependent transport mechanism for iron(III) dicitrate in Escherichia coli.
    J Bacteriol. 1989 May;171(5):2626-33 PMID: 2651410
  30. Isolation of large bacterial plasmids and characterization of the P2 incompatibility group plasmids pMG1 and pMG5.
    J Bacteriol. 1978 Jul;135(1):227-38 PMID: 97269
  31. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  32. The formation of bacteriochlorophyll.protein complexes of the photosynthetic apparatus of Rhodopseudomonas capsulata during early stages of development.
    Biochim Biophys Acta. 1978 Feb 9;501(2):183-94 PMID: 620011
  33. Oxidative phosphorylation in extracts of Rhodospirillum rubrum.
    J Biol Chem. 1962 Sep;237:2947-54 PMID: 13897625
  34. Recognition sequence of the dam methylase of Escherichia coli K12 and mode of cleavage of Dpn I endonuclease.
    J Biol Chem. 1979 Feb 25;254(4):1408-13 PMID: 368070
  35. Broad host range cloning vectors for gram-negative bacteria.
    Gene. 1984 Jul-Aug;29(1-2):93-102 PMID: 6092235
  36. Extension of a flexible computer program for handling DNA sequence data.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):113-20 PMID: 6694895
  37. Regulation of the fixA gene and fixBC operon in Bradyrhizobium japonicum.
    J Bacteriol. 1988 Mar;170(3):1205-14 PMID: 3343218
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1989-09-00
Pages
4914-22
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC210297
Subset
IM
Databases
GENBANK
M28510
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]