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PMID: 25490935 Published · epublish English Journal Article Comment

Registered report: Melanoma genome sequencing reveals frequent PREX2 mutations.

eLife ·Vol. 3 ·2014-12-10

Chroscinski D, Sampey D, Hewitt A, Reproducibility Project: Cancer Biology

Abstract

The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility in scientific research by conducting replications of 50 papers in the field of cancer biology published between 2010 and 2012. This Registered Report describes the proposed replication plan of key experiments from "Melanoma genome sequencing reveals frequent PREX2 mutations" by Berger and colleagues, published in Nature in 2012 (Berger et al., 2012). The key experiments that will be replicated are those reported in Figure 3B and Supplementary Figure S6. In these experiments, Berger and colleagues show that somatic PREX2 mutations identified through whole-genome sequencing of human melanoma can contribute to enhanced lethality of tumor xenografts in nude mice (Figure 3B, S6B, and S6C; Berger et al., 2012). The Reproducibility Project: Cancer Biology is a collaboration between the Center for Open Science and Science Exchange, and the results of the replications will be published by eLife.

Keywords
Reproducibility Project: Cancer Biology cancer genomics cell biology driver mutations human biology medicine melanoma methodology mouse
MeSH Terms
Genome, Human/genetics Guanine Nucleotide Exchange Factors/genetics Humans Melanoma/genetics Mutation/genetics Sunlight/adverse effects
Chemicals
Guanine Nucleotide Exchange Factors
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Chroscinski Denise
Noble Life Sciences, Gaithersburg, United States.
Sampey Darryl
BioFactura, Frederick, United States.
Hewitt Alex
Department of Clinical Genetics, University of Melbourne, Melbourne, Australia.
Reproducibility Project: Cancer Biology
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Article Info
Journal
eLife
Abbr.
Elife
ISSN
2050-084X
Published
2014-12-10
Epub
2014-00-10
Language
English
Region
England
NLM ID
101579614
PMCID
PMC4270141
Subset
IM
Corrections
CommentOn
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