Home LiteratureArticle Details
PMID: 2566996 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Loss of heterozygosity for the short arm of chromosome 1 in human neuroblastomas: correlation with N-myc amplification.

Fong CT, Dracopoli NC, White PS, Merrill PT, Griffith RC, Housman DE, Brodeur GM

Abstract

Partial monosomy of the short arm of chromosome 1 is the most consistent cytogenetic abnormality found in human neuroblastomas, but its overall frequency and significance are unclear. Using a panel of chromosome-1-specific DNA probes that identify restriction fragment length polymorphisms, we demonstrate that 13 of 47 human neuroblastomas (28%) have somatic loss of heterozygosity (LOH) at one or more loci on the distal short arm of chromosome 1. the chromosomal region that shows LOH most consistently is between 1p36.1 and 1p36.3; loss of a gene or genes in this region may be critical for the development or progression of neuroblastomas. The region of LOH in human neuroblastoma may resemble that described for pheochromocytoma, medullary thyroid carcinoma, and melanoma, which are also tumors of neural-crest origin. Although LOH for distal chromosome 1p can occur in early stages of neuroblastoma, the loss usually occurs in tumors of advanced clinical stages. LOH for the short arm of chromosome 1 correlates significantly with N-myc amplification, suggesting that these two genetic events are related. Indeed, these two lesions appear to characterize a genetically distinct subset of particularly aggressive neuroblastomas.

MeSH Terms
Chromosome Deletion Chromosome Mapping Chromosomes, Human, Pair 1 DNA Probes Gene Amplification Heterozygote Humans Neuroblastoma/genetics Polymorphism, Restriction Fragment Length Prognosis Proto-Oncogene Proteins/genetics Proto-Oncogene Proteins c-myc
Chemicals
DNA Probes Proto-Oncogene Proteins Proto-Oncogene Proteins c-myc
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Fong C T
Department of Pediatrics, Washington University School of Medicine, Saint Louis, MO 63110.
Dracopoli N C
White P S
Merrill P T
Griffith R C
Housman D E
Brodeur G M
References (55)
55 references, click to expand
  1. Deletion of a DNA sequence at the chromosomal region 3p21 in all major types of lung cancer.
    Nature. 1987 Dec 10-16;330(6148):578-81 PMID: 2825033
  2. Molecular correlates of cytogenetic abnormalities in human cancer cells: implications for oncogene activation.
    Prog Hematol. 1986;14:229-56 PMID: 3003796
  3. Loss of constitutional heterozygosity in colon carcinoma from patients with familial polyposis coli.
    Nature. 1988 Jan 21;331(6153):273-7 PMID: 2827040
  4. Deletions of a DNA sequence in retinoblastomas and mesenchymal tumors: organization of the sequence and its encoded protein.
    Proc Natl Acad Sci U S A. 1987 Dec;84(24):9059-63 PMID: 3480530
  5. Loss of genes on chromosome 22 in tumorigenesis of human acoustic neuroma.
    Nature. 1986 Aug 14-20;322(6080):644-7 PMID: 3092103
  6. A human DNA segment with properties of the gene that predisposes to retinoblastoma and osteosarcoma.
    Nature. 1986 Oct 16-22;323(6089):643-6 PMID: 2877398
  7. Human atrial natriuretic peptides (ANP) gene locus: BglI RFLP.
    Nucleic Acids Res. 1986 Nov 25;14(22):9223 PMID: 2878420
  8. Pvu II RFLP at the human chromosome 1 alpha-L-fucosidase gene locus (FUCA1).
    Nucleic Acids Res. 1986 Dec 9;14(23):9543 PMID: 2879270
  9. Human retinoblastoma susceptibility gene: cloning, identification, and sequence.
    Science. 1987 Mar 13;235(4794):1394-9 PMID: 3823889
  10. Variable number of tandem repeat (VNTR) markers for human gene mapping.
    Science. 1987 Mar 27;235(4796):1616-22 PMID: 3029872
  11. Loss of heterozygosity in human ductal breast tumors indicates a recessive mutation on chromosome 13.
    Proc Natl Acad Sci U S A. 1987 Apr;84(8):2372-6 PMID: 3031679
  12. Common pathogenetic mechanism for three tumor types in bilateral acoustic neurofibromatosis.
    Science. 1987 Apr 17;236(4799):317-9 PMID: 3105060
  13. Loss of alleles of loci on the short arm of chromosome 3 in renal cell carcinoma.
    Nature. 1987 Jun 25-Jul 1;327(6124):721-4 PMID: 2885753
  14. Molecular genetic approach to human meningioma: loss of genes on chromosome 22.
    Proc Natl Acad Sci U S A. 1987 Aug;84(15):5419-23 PMID: 3037550
  15. Structural evidence for the authenticity of the human retinoblastoma gene.
    Science. 1987 Jun 26;236(4809):1657-61 PMID: 2885916
  16. Consistent N-myc copy number in simultaneous or consecutive neuroblastoma samples from sixty individual patients.
    Cancer Res. 1987 Aug 15;47(16):4248-53 PMID: 2440561
  17. Deletion of genes on chromosome 1 in endocrine neoplasia.
    Nature. 1987 Aug 6-12;328(6130):524-6 PMID: 3614355
  18. Chromosome 5 allele loss in human colorectal carcinomas.
    Nature. 1987 Aug 13-19;328(6131):616-9 PMID: 2886919
  19. A hypervariable repeated sequence on human chromosome 1p36.
    Hum Genet. 1987 Oct;77(2):175-81 PMID: 2888721
  20. Structural gene for beta-nerve growth factor not defective in familial dysautonomia.
    Proc Natl Acad Sci U S A. 1984 Jul;81(13):4213-6 PMID: 6330750
  21. Human renin gene: structure and sequence analysis.
    Proc Natl Acad Sci U S A. 1984 Aug;81(16):5026-30 PMID: 6089171
  22. Human neuroblastomas and abnormalities of chromosomes 1 and 17.
    Cancer Res. 1984 Nov;44(11):5444-9 PMID: 6488196
  23. Loss of heterozygosity in three embryonal tumours suggests a common pathogenetic mechanism.
    Nature. 1985 Jul 25-31;316(6026):330-4 PMID: 2991766
  24. Osteosarcoma and retinoblastoma: a shared chromosomal mechanism revealing recessive predisposition.
    Proc Natl Acad Sci U S A. 1985 Sep;82(18):6216-20 PMID: 2994066
  25. Association of multiple copies of the N-myc oncogene with rapid progression of neuroblastomas.
    N Engl J Med. 1985 Oct 31;313(18):1111-6 PMID: 4047115
  26. Molecular analysis of the short arm of chromosome 3 in small-cell and non-small-cell carcinoma of the lung.
    N Engl J Med. 1987 Oct 29;317(18):1109-13 PMID: 2821398
  27. Loss of heterozygosity of chromosome 3p markers in small-cell lung cancer.
    Nature. 1987 Oct 1-7;329(6138):451-4 PMID: 2821400
  28. The retinoblastoma susceptibility gene encodes a nuclear phosphoprotein associated with DNA binding activity.
    Nature. 1987 Oct 15-21;329(6140):642-5 PMID: 3657987
  29. Chromosomal localization of the human rhabdomyosarcoma locus by mitotic recombination mapping.
    Nature. 1987 Oct 15-21;329(6140):645-7 PMID: 3657988
  30. Reduction to homozygosity of genes on chromosome 11 in human breast neoplasia.
    Science. 1987 Oct 9;238(4824):185-8 PMID: 3659909
  31. Clonal analysis of human colorectal tumors.
    Science. 1987 Oct 9;238(4824):193-7 PMID: 2889267
  32. A genetic linkage map of the human genome.
    Cell. 1987 Oct 23;51(2):319-37 PMID: 3664638
  33. Deletion mapping of a locus on human chromosome 22 involved in the oncogenesis of meningioma.
    Proc Natl Acad Sci U S A. 1987 Dec;84(24):9275-9 PMID: 2892198
  34. Consistent chromosome 3p deletion and loss of heterozygosity in renal cell carcinoma.
    Proc Natl Acad Sci U S A. 1988 Mar;85(5):1571-5 PMID: 2894030
  35. Multiple endocrine neoplasia type 1 gene maps to chromosome 11 and is lost in insulinoma.
    Nature. 1988 Mar 3;332(6159):85-7 PMID: 2894610
  36. Tumour karyotype discriminates between good and bad prognostic outcome in neuroblastoma.
    Br J Cancer. 1988 Jan;57(1):121-6 PMID: 3348945
  37. Infrequent genomic rearrangement and normal expression of the putative RB1 gene in retinoblastoma tumors.
    Mol Cell Biol. 1988 May;8(5):2082-8 PMID: 2898730
  38. Molecular analysis and clinical significance of N-myc amplification and chromosome 1p monosomy in human neuroblastomas.
    Prog Clin Biol Res. 1988;271:3-15 PMID: 3043452
  39. A genetic linkage map of 27 loci from PND to FY on the short arm of human chromosome I.
    Am J Hum Genet. 1988 Oct;43(4):462-70 PMID: 2902785
  40. International criteria for diagnosis, staging, and response to treatment in patients with neuroblastoma.
    J Clin Oncol. 1988 Dec;6(12):1874-81 PMID: 3199170
  41. Suppression of the neoplastic phenotype by replacement of the RB gene in human cancer cells.
    Science. 1988 Dec 16;242(4885):1563-6 PMID: 3201247
  42. Localization of the FGR protooncogene on the genetic linkage map of human chromosome 1p.
    Genomics. 1988 Aug;3(2):124-8 PMID: 2906322
  43. Cytogenetic features of human neuroblastomas and cell lines.
    Cancer Res. 1981 Nov;41(11 Pt 1):4678-86 PMID: 6171342
  44. Statistical analysis of cytogenetic abnormalities in human cancer cells.
    Cancer Genet Cytogenet. 1982 Oct;7(2):137-52 PMID: 7172163
  45. Isolation of a cDNA clone for human antithrombin III.
    J Biol Chem. 1983 Jul 10;258(13):8389-94 PMID: 6305982
  46. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.
    Anal Biochem. 1983 Jul 1;132(1):6-13 PMID: 6312838
  47. Expression of recessive alleles by chromosomal mechanisms in retinoblastoma.
    Nature. 1983 Oct 27-Nov 2;305(5937):779-84 PMID: 6633649
  48. Loss of alleles at loci on human chromosome 11 during genesis of Wilms' tumour.
    Nature. 1984 May 10-16;309(5964):170-2 PMID: 6325936
  49. Development of homozygosity for chromosome 11p markers in Wilms' tumour.
    Nature. 1984 May 10-16;309(5964):172-4 PMID: 6325937
  50. Amplification of N-myc in untreated human neuroblastomas correlates with advanced disease stage.
    Science. 1984 Jun 8;224(4653):1121-4 PMID: 6719137
  51. Corrected sequences of cDNAs for human salivary and pancreatic alpha-amylases [corrected].
    Gene. 1984 May;28(2):263-70 PMID: 6610603
  52. L-myc, a new myc-related gene amplified and expressed in human small cell lung cancer.
    Nature. 1985 Nov 7-13;318(6041):69-73 PMID: 2997622
  53. Report of the Committee on Human Gene Mapping by Recombinant DNA Techniques.
    Cytogenet Cell Genet. 1985;40(1-4):360-489 PMID: 3864601
  54. Loss of genes on the short arm of chromosome 11 in bladder cancer.
    Nature. 1985 Nov 28-Dec 4;318(6044):377-80 PMID: 2999610
  55. The involvement of oncogenes and suppressor genes in human neoplasia.
    Adv Pediatr. 1987;34:1-44 PMID: 3318293
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1989-05-00
Pages
3753-7
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC287218
Subset
IM
Grants
NCI NIH HHS · CA01027 · United States
NCI NIH HHS · CA39771 · United States
NCI NIH HHS · CA44176 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]