Home LiteratureArticle Details
PMID: 26682719 Published · ppublish English

Non-invasive exhaled volatile organic biomarker analysis to detect inflammatory bowel disease (IBD).

Arasaradnam Ramesh P, McFarlane Michael, Daulton Emma, Skinner Jim, O'Connell Nicola, Wurie Subiatu, Chambers Samantha, Nwokolo Chuka, Bardhan Karna, Savage Richard, Covington James

Abstract

Early inflammatory bowel disease (IBD) diagnosis remains a clinical challenge. Volatile organic compounds (VOCs) have shown distinct patterns in Crohn's disease (CD) and ulcerative colitis (UC). VOC production, reflecting gut fermentome metabolites, is perturbed in IBD. VOC sampling is non-invasive, with various compounds identified from faecal, breath and urine samples. This study aimed to determine if FAIMS (field asymmetric ion mobility spectroscopy) analysis of exhaled VOCs could distinguish IBD from controls.,Seventy-six subjects were recruited, 54 established IBD (25 CD, 29 UC) and 22 healthy controls. End expiratory breath was captured using a Warwick device and analysed by FAIMS. Data were pre-processed using wavelet transformation, and classification performed in a 10-fold cross-validation. Feature selection was performed using Wilcoxon rank sum test, and sparse logistic regression gave class predictions, to calculate sensitivity and specificity.,FAIMS breath VOC analysis showed clear separation of IBD from controls, sensitivity: 0.74 (0.65-0.82), specificity: 0.75 (0.53-0.90), AUROC: 0.82 (0.74-0.89), p-value 6.2×10(-7). IBD subgroup analysis distinguished UC from CD: sensitivity of 0.67 (0.54-0.79), specificity: 0.67 (0.54-0.79), AUROC: 0.70 (0.60-0.80), p-value 9.23×10(-4).,This confirms the utility of exhaled VOC analysis to distinguish IBD from healthy controls, and UC from CD. It conforms to other studies using different technology, whilst affirming exhaled VOCs as biomarkers for diagnosing IBD.

Keywords
Breath Crohn's IBD IMS Non-invasive UC Volatile organic compounds
Article Info
Journal
Digestive and liver disease : official journal of the Italian Society of Gastroenterology and the Italian Association for the Study of the Liver
Abbr.
Dig Liver Dis
Published
0000-00-00
Indexed
2016-02-08
Updated
2016-02-08
Language
English
Country/Region
Netherlands
NLM ID
100958385
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]