Home LiteratureArticle Details
PMID: 2844524 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Two distinct factors interact with the promoter regions of several liver-specific genes.

The EMBO journal ·Vol. 7 ·No. 6 ·1988-06-00 ·Pages 1711-9

Hardon EM, Frain M, Paonessa G, Cortese R

Abstract

A segment of the human alpha 1-antitrypsin (alpha 1AT) 5'-flanking region comprising nucleotides -137 to -37 from the start of transcription is sufficient to drive liver-specific transcription from the homologous alpha 1AT promoter and from the heterologous SV40 promoter. In this paper we characterize two proteins, LF-A1 and LF-B1, whose ability to bind wild-type and mutant alpha 1AT promoter segments correlates with the ability of these segments to activate transcription in vivo. DNase I protection and methylation interference analysis reveals that LF-A1 recognizes sequences present in the regulatory region of the human alpha 1-antitrypsin, apolipoprotein A1 and haptoglobin-related genes. These sequences share a common 5' TGG/A A/C CC 3' motif. LF-B1 binds to the palindrome 5' TGGTTAAT/ATTCACCA 3' which is present in the human alpha 1-antitrypsin gene between positions -78 and -62 from the start of transcription. LF-B1 also recognizes a related sequence present in the human albumin gene between -66 and -50. These results suggest that LF-A1 and LF-B1 are common positive trans-acting factors which are required for the expression of several genes in the hepatocyte.

MeSH Terms
Albumins/genetics Animals Apolipoprotein A-I Apolipoproteins A/genetics Base Sequence Binding Sites Enzyme Induction Gene Expression Regulation Genes, Viral Haptoglobins/genetics Humans Liver/metabolism Mice Molecular Sequence Data Organ Specificity Promoter Regions, Genetic Sequence Homology, Nucleic Acid Simian virus 40/genetics Transcription Factors/metabolism alpha 1-Antitrypsin/biosynthesis,genetics
Chemicals
Albumins Apolipoprotein A-I Apolipoproteins A Haptoglobins Transcription Factors alpha 1-Antitrypsin
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Hardon E M
European Molecular Biology Laboratory, Heidelberg, FRG.
Frain M
Paonessa G
Cortese R
References (25)
25 references, click to expand
  1. DNAse footprinting: a simple method for the detection of protein-DNA binding specificity.
    Nucleic Acids Res. 1978 Sep;5(9):3157-70 PMID: 212715
  2. Contacts between Escherichia coli RNA polymerase and an early promoter of phage T7.
    Proc Natl Acad Sci U S A. 1980 Jan;77(1):122-6 PMID: 6987648
  3. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  4. Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis.
    Nucleic Acids Res. 1981 Dec 11;9(23):6505-25 PMID: 6275366
  5. Multiple point mutations affecting the simian virus 40 enhancer.
    Science. 1983 Feb 11;219(4585):626-31 PMID: 6297005
  6. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.
    Nucleic Acids Res. 1983 Mar 11;11(5):1475-89 PMID: 6828386
  7. Cell-specific expression of a transfected human alpha 1-antitrypsin gene.
    Cell. 1985 Jun;41(2):531-40 PMID: 2985281
  8. The cellular defect in alpha 1-proteinase inhibitor (alpha 1-PI) deficiency is expressed in human monocytes and in Xenopus oocytes injected with human liver mRNA.
    Proc Natl Acad Sci U S A. 1985 Oct;82(20):6918-21 PMID: 3876562
  9. Structure and cell-specific expression of a cloned human retinol binding protein gene: the 5'-flanking region contains hepatoma specific transcriptional signals.
    EMBO J. 1985 Aug;4(8):1981-9 PMID: 2998779
  10. The human albumin gene. Characterization of the 5' and 3' flanking regions and the polymorphic gene transcripts.
    J Biol Chem. 1986 Mar 5;261(7):3244-51 PMID: 2419329
  11. A sensitive and rapid gel retention assay for nuclear factor I and other DNA-binding proteins in crude nuclear extracts.
    Nucleic Acids Res. 1986 Feb 11;14(3):1303-17 PMID: 3513122
  12. Affinity purification of sequence-specific DNA binding proteins.
    Proc Natl Acad Sci U S A. 1986 Aug;83(16):5889-93 PMID: 3461465
  13. Tissue-specific in vitro transcription from the mouse albumin promoter.
    Cell. 1986 Dec 5;47(5):767-76 PMID: 3779841
  14. A cellular protein binds to a conserved sequence in the adenovirus type 2 enhancer.
    Nucleic Acids Res. 1987 Mar 25;15(6):2719-35 PMID: 3031610
  15. Regulation of inducible and tissue-specific gene expression.
    Science. 1987 Jun 5;236(4806):1237-45 PMID: 3296191
  16. Factors involved in control of tissue-specific expression of albumin gene.
    Cell. 1987 Aug 14;50(4):627-38 PMID: 3607880
  17. A multiplicity of CCAAT box-binding proteins.
    Cell. 1987 Sep 11;50(6):863-72 PMID: 3476205
  18. The human haptoglobin gene: transcriptional regulation during development and acute phase induction.
    EMBO J. 1987 Jul;6(7):1905-12 PMID: 2820712
  19. Properties of a CCAAT box-binding protein.
    Nucleic Acids Res. 1987 Sep 25;15(18):7265-82 PMID: 3477778
  20. Interaction of a liver-specific nuclear factor with the fibrinogen and alpha 1-antitrypsin promoters.
    Science. 1987 Oct 30;238(4827):688-92 PMID: 3499668
  21. Cis- and trans-acting elements responsible for the cell-specific expression of the human alpha 1-antitrypsin gene.
    EMBO J. 1987 Sep;6(9):2759-66 PMID: 2824193
  22. The human alpha 1-antitrypsin gene is transcribed from two different promoters in macrophages and hepatocytes.
    EMBO J. 1987 Sep;6(9):2767-71 PMID: 3500042
  23. Factors that interact with the rat albumin promoter are present both in hepatocytes and other cell types.
    Genes Dev. 1987 May;1(3):256-67 PMID: 3678823
  24. DNA denatures upon drying after ethanol precipitation.
    Nucleic Acids Res. 1987 Nov 11;15(21):8739-54 PMID: 3684571
  25. The interplay of DNA-binding proteins on the promoter of the mouse albumin gene.
    Cell. 1987 Dec 24;51(6):963-73 PMID: 3690666
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1988-06-00
Pages
1711-9
Language
English
Region
England
NLM ID
8208664
PMCID
PMC457158
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]