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PMID: 2845144 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Direct correlation between a negative autoregulatory response element at the cap site of the herpes simplex virus type 1 IE175 (alpha 4) promoter and a specific binding site for the IE175 (ICP4) protein.

Journal of virology ·Vol. 62 ·No. 11 ·1988-11-00 ·Pages 4307-20

Roberts MS, Boundy A, O'Hare P, Pizzorno MC, Ciufo DM, Hayward GS

Abstract

In transient-expression assays, the IE175 (alpha 4) promoter region of herpes simple virus is down-regulated after cotransfection with DNA encoding its own protein product (IE175 or ICP4). The inhibition by IE175 proved to be highly specific for its own promoter region and did not act on either the herpes simplex virus type 1 IE110 (alpha 0) or human cytomegalovirus major immediate-early promoters. Furthermore, the inhibition was still exhibited by IE175 effector plasmids driven by strong heterologous promoters and therefore must be a direct autoregulatory response that cannot be explained by promoter competition effects. In gel mobility retardation assays with infected-cell nuclear extracts, a prominent and specific DNA-protein complex was formed with DNA fragments containing sequences from -108 to +30 in the IE175 promoter region. This activity was not present in mock-infected samples. Even stronger binding occurred with a fragment containing sequences from -128 to +120 in the IE110 promoter, but this second locus was not associated with any detectable response phenotype in cotransfection assays. Supershift experiments with an anti-IE175 monoclonal antibody confirmed the presence of the IE175 protein in both DNA-protein complexes. In the IE175 promoter, specific binding correlated closely with the presence of an intact autoregulatory signal near the cap site as judged by the loss of both activities in a 3'-deleted promoter fragment lacking sequences from -7 to +30. Insertion of a cloned 30-mer synthetic oligonucleotide sequence from positions -8 to +18 in IE175 restored both IE175 binding activity and the down-regulation phenotype. Direct shift-up assays with a similar 30-base-pair (bp) oligonucleotide containing 21 bp from positions -75 to -55 of IE110 (which encompasses a consensus ATCGTC motif) also produced a specific DNA-protein complex containing the IE175 protein. This ATCGTC motif proved to be a necessary component of both the IE110 and IE175 binding sites, but was insufficient on its own for complex formation. Finally, deletion of 2 bp from positions -3 and -4 within the ATCGTC sequence in the IE175 cap site region abolished both binding activity and the IE175-dependent autoregulation phenotype.

MeSH Terms
Animals Base Sequence Binding Sites Cell Extracts Chloramphenicol O-Acetyltransferase Cloning, Molecular DNA-Binding Proteins/metabolism,physiology Electrophoresis, Polyacrylamide Gel Gene Expression Regulation Genes, Viral Homeostasis Immediate-Early Proteins Oligonucleotide Probes/chemical synthesis Plasmids Promoter Regions, Genetic Restriction Mapping Simplexvirus/genetics Transcription Factors/metabolism,physiology Transfection Vero Cells Viral Proteins/metabolism,physiology
Chemicals
Cell Extracts DNA-Binding Proteins Immediate-Early Proteins Oligonucleotide Probes Transcription Factors Viral Proteins herpes simplex virus, type 1 protein ICP4 Chloramphenicol O-Acetyltransferase
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Roberts M S
Department of Pharmacology and Molecular Sciences, Johns Hopkins School of Medicine, Baltimore, Maryland 21205.
Boundy A
O'Hare P
Pizzorno M C
Ciufo D M
Hayward G S
References (61)
61 references, click to expand
  1. Isolation of herpes simplex virus regulatory protein ICP4 as a homodimeric complex.
    J Virol. 1985 Aug;55(2):329-37 PMID: 2991559
  2. trans-activation and autoregulation of gene expression by the immediate-early region 2 gene products of human cytomegalovirus.
    J Virol. 1988 Apr;62(4):1167-79 PMID: 2831379
  3. Herpes simplex virus gene expression in transformed cells. I. Regulation of the viral thymidine kinase gene in transformed L cells by products of superinfecting virus.
    J Virol. 1976 Nov;20(2):413-24 PMID: 185425
  4. Control of herpes simplex virus type 1 mRNA synthesis in cells infected with wild-type virus or the temperature-sensitive mutant tsK.
    J Virol. 1979 Jan;29(1):275-84 PMID: 219222
  5. A herpes simplex virus type 1 function continuously required for early and late virus RNA synthesis.
    Nature. 1980 May 29;285(5763):329-30 PMID: 6246451
  6. Herpes simplex virus thymidine kinase transcripts are absent from both nucleus and cytoplasm during infection in the presence of cycloheximide.
    J Virol. 1980 Nov;36(2):361-5 PMID: 6253662
  7. Regulation of herpesvirus macromolecular synthesis: transcription-initiation sites and domains of alpha genes.
    Proc Natl Acad Sci U S A. 1980 Dec;77(12):7122-6 PMID: 6261240
  8. Regulation of alpha genes of herpes simplex virus: expression of chimeric genes produced by fusion of thymidine kinase with alpha gene promoters.
    Cell. 1981 May;24(2):555-65 PMID: 6263501
  9. A gel electrophoresis method for quantifying the binding of proteins to specific DNA regions: application to components of the Escherichia coli lactose operon regulatory system.
    Nucleic Acids Res. 1981 Jul 10;9(13):3047-60 PMID: 6269071
  10. SV40 gene expression is modulated by the cooperative binding of T antigen to DNA.
    Cell. 1981 Aug;25(2):373-84 PMID: 6269743
  11. Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis.
    Nucleic Acids Res. 1981 Dec 11;9(23):6505-25 PMID: 6275366
  12. Monoclonal antibodies to herpes simplex virus type 1 proteins, including the immediate-early protein ICP 4.
    Infect Immun. 1981 Dec;34(3):684-92 PMID: 6277788
  13. DNA sequence of an immediate-early gene (IEmRNA-5) of herpes simplex virus type I.
    Nucleic Acids Res. 1982 Feb 11;10(3):979-91 PMID: 6278443
  14. Expression of human beta-interferon cDNA under the control of a thymidine kinase promoter from herpes simplex virus.
    Nature. 1982 Jun 17;297(5867):598-601 PMID: 6178031
  15. DNA sequence analysis of an immediate-early gene region of the herpes simplex virus type 1 genome (map coordinates 0.950 to 0.978).
    J Gen Virol. 1982 Sep;62 (Pt 1):1-15 PMID: 6290591
  16. DNA-binding properties of a herpes simplex virus immediate early protein.
    J Virol. 1982 Dec;44(3):1084-7 PMID: 6294324
  17. Isolation and characterization of deletion mutants of herpes simplex virus type 1 in the gene encoding immediate-early regulatory protein ICP4.
    J Virol. 1985 Nov;56(2):558-70 PMID: 2997476
  18. Structural features of the herpes simplex virus alpha gene 4, 0, and 27 promoter-regulatory sequences which confer alpha regulation on chimeric thymidine kinase genes.
    J Virol. 1982 Dec;44(3):939-49 PMID: 6294341
  19. Characterization of the herpes simplex virion-associated factor responsible for the induction of alpha genes.
    J Virol. 1983 May;46(2):371-7 PMID: 6302308
  20. Immediate-early mRNA-2 of herpes simplex viruses types 1 and 2 is unspliced: conserved sequences around the 5' and 3' termini correspond to transcription regulatory signals.
    Nucleic Acids Res. 1983 Sep 24;11(18):6271-87 PMID: 6312416
  21. Expression of herpes simplex virus beta and gamma genes integrated in mammalian cells and their induction by an alpha gene product.
    Mol Cell Biol. 1983 Nov;3(11):2028-44 PMID: 6318078
  22. Control of expression of the herpes simplex virus thymidine kinase gene in biochemically transformed cells.
    J Gen Virol. 1984 Jan;65 ( Pt 1):19-36 PMID: 6319567
  23. Transcriptional regulation of a herpes simplex virus immediate early gene is mediated through an enhancer-type sequence.
    EMBO J. 1984 Feb;3(2):389-95 PMID: 6325170
  24. Transactivation of a late herpes simplex virus promoter.
    Mol Cell Biol. 1984 Mar;4(3):544-51 PMID: 6325883
  25. Analysis of DNA sequences which regulate the transcription of a herpes simplex virus immediate early gene.
    J Virol. 1984 Jun;50(3):708-16 PMID: 6328000
  26. Separation of sequences defining basal expression from those conferring alpha gene recognition within the regulatory domains of herpes simplex virus 1 alpha genes.
    Proc Natl Acad Sci U S A. 1984 Jul;81(13):4065-9 PMID: 6330737
  27. Trans activation of plasmid-borne promoters by adenovirus and several herpes group viruses.
    Nucleic Acids Res. 1984 Aug 10;12(15):5969-78 PMID: 6089105
  28. Expression of recombinant genes containing herpes simplex virus delayed-early and immediate-early regulatory regions and trans activation by herpesvirus infection.
    J Virol. 1984 Nov;52(2):522-31 PMID: 6092673
  29. Identification of herpes simplex virus DNA sequences which encode a trans-acting polypeptide responsible for stimulation of immediate early transcription.
    J Mol Biol. 1984 Nov 25;180(1):1-19 PMID: 6096556
  30. Trans activation of transcription by herpes virus products: requirement for two HSV-1 immediate-early polypeptides for maximum activity.
    EMBO J. 1984 Dec 20;3(13):3135-41 PMID: 6098466
  31. Evidence for a direct role for both the 175,000- and 110,000-molecular-weight immediate-early proteins of herpes simplex virus in the transactivation of delayed-early promoters.
    J Virol. 1985 Mar;53(3):751-60 PMID: 2983086
  32. Cells that constitutively express the herpes simplex virus immediate-early protein ICP4 allow efficient activation of viral delayed-early genes in trans.
    J Virol. 1985 May;54(2):414-21 PMID: 2985804
  33. Stimulation of expression of a herpes simplex virus DNA-binding protein by two viral functions.
    Mol Cell Biol. 1985 May;5(5):957-63 PMID: 2987684
  34. Activation and inhibition of expression of the 72,000-Da early protein of adenovirus type 5 in mouse cells constitutively expressing an immediate early protein of herpes simplex virus type 1.
    Virology. 1985 Jul 15;144(1):35-45 PMID: 2998046
  35. Three trans-acting regulatory proteins of herpes simplex virus modulate immediate-early gene expression in a pathway involving positive and negative feedback regulation.
    J Virol. 1985 Dec;56(3):723-33 PMID: 2999428
  36. Differential activation of hybrid genes containing herpes simplex virus immediate-early or delayed-early promoters after superinfection of stable DNA-transfected cell lines.
    J Virol. 1985 Dec;56(3):867-78 PMID: 2415716
  37. DNA sequence of the herpes simplex virus type 1 gene whose product is responsible for transcriptional activation of immediate early promoters.
    Nucleic Acids Res. 1985 Nov 11;13(21):7865-79 PMID: 2999707
  38. An RNA polymerase II transcription factor binds to an upstream element in the adenovirus major late promoter.
    Cell. 1985 Dec;43(2 Pt 1):439-48 PMID: 4075400
  39. Repression of adenovirus early gene expression by coinfection with a temperature-sensitive mutant in the immediate-early gene of pseudorabies virus.
    J Virol. 1986 Jan;57(1):13-7 PMID: 3001339
  40. The terminal a sequence of the herpes simplex virus genome contains the promoter of a gene located in the repeat sequences of the L component.
    J Virol. 1986 Feb;57(2):629-37 PMID: 3003394
  41. Alpha 4, the major regulatory protein of herpes simplex virus type 1, is stably and specifically associated with promoter-regulatory domains of alpha genes and of selected other viral genes.
    Proc Natl Acad Sci U S A. 1986 May;83(10):3218-22 PMID: 3010285
  42. DNA-binding site of major regulatory protein alpha 4 specifically associated with promoter-regulatory domains of alpha genes of herpes simplex virus type 1.
    Proc Natl Acad Sci U S A. 1986 Jul;83(13):4700-4 PMID: 3014505
  43. Activation of immediate-early, early, and late promoters by temperature-sensitive and wild-type forms of herpes simplex virus type 1 protein ICP4.
    Mol Cell Biol. 1985 Aug;5(8):1997-2008 PMID: 3018543
  44. Association of the herpes simplex virus regulatory protein ICP4 with specific nucleotide sequences in DNA.
    Nucleic Acids Res. 1986 Aug 11;14(15):6067-83 PMID: 3018669
  45. A genetic approach to promoter recognition during trans induction of viral gene expression.
    Science. 1986 Oct 3;234(4772):53-9 PMID: 3018926
  46. Characterization of the IE110 gene of herpes simplex virus type 1.
    J Gen Virol. 1986 Nov;67 ( Pt 11):2365-80 PMID: 3023529
  47. Regulation of transcription in vitro from herpes simplex virus genes.
    J Virol. 1986 Dec;60(3):950-9 PMID: 3023683
  48. Comparison of upstream sequence requirements for positive and negative regulation of a herpes simplex virus immediate-early gene by three virus-encoded trans-acting factors.
    J Virol. 1987 Jan;61(1):190-9 PMID: 3023697
  49. Isolation and characterization of a herpes simplex virus type 1 mutant containing a deletion within the gene encoding the immediate early polypeptide Vmw110.
    J Gen Virol. 1986 Dec;67 ( Pt 12):2571-85 PMID: 3025339
  50. Deletion mutants in the gene encoding the herpes simplex virus type 1 immediate-early protein ICP0 exhibit impaired growth in cell culture.
    J Virol. 1987 Mar;61(3):829-39 PMID: 3027408
  51. Binding of the herpes simplex virus immediate-early gene product ICP4 to its own transcription start site.
    J Virol. 1987 Mar;61(3):858-65 PMID: 3027412
  52. Co-ordinate regulation of herpes simplex virus gene expression is mediated by the functional interaction of two immediate early gene products.
    J Mol Biol. 1986 Oct 5;191(3):395-409 PMID: 3029383
  53. RNA complementary to a herpesvirus alpha gene mRNA is prominent in latently infected neurons.
    Science. 1987 Feb 27;235(4792):1056-9 PMID: 2434993
  54. Multiple tandemly repeated binding sites for cellular nuclear factor 1 that surround the major immediate-early promoters of simian and human cytomegalovirus.
    J Virol. 1987 May;61(5):1559-70 PMID: 3033283
  55. Dissection of immediate-early gene promoters from herpes simplex virus: sequences that respond to the virus transcriptional activators.
    J Virol. 1987 Oct;61(10):3167-72 PMID: 3041038
  56. Transcriptional and post-transcriptional controls establish the cascade of herpes simplex virus protein synthesis.
    J Mol Biol. 1987 Jun 20;195(4):819-33 PMID: 2821283
  57. Regulation of glycoprotein D synthesis: does alpha 4, the major regulatory protein of herpes simplex virus 1, regulate late genes both positively and negatively?
    J Virol. 1988 Jan;62(1):148-58 PMID: 2824843
  58. Physical and functional domains of the herpes simplex virus transcriptional regulatory protein ICP4.
    J Virol. 1988 Mar;62(3):732-43 PMID: 2828668
  59. Association of herpes simplex virus regulatory protein ICP4 with sequences spanning the ICP4 gene transcription initiation site.
    Nucleic Acids Res. 1988 Jan 25;16(2):555-70 PMID: 2829130
  60. Herpes simplex virus regulatory elements and the immunoglobulin octamer domain bind a common factor and are both targets for virion transactivation.
    Cell. 1988 Feb 12;52(3):435-45 PMID: 2830987
  61. Identification of immediate early genes from herpes simplex virus that transactivate the virus thymidine kinase gene.
    Proc Natl Acad Sci U S A. 1985 Aug;82(16):5265-9 PMID: 2991915
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1988-11-00
Pages
4307-20
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC253866
Subset
IM
Grants
NCI NIH HHS · R01 CA22130 · United States
NCI NIH HHS · R01 CA28473 · United States
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