Home LiteratureArticle Details
PMID: 2847919 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

A variant nuclear protein in dedifferentiated hepatoma cells binds to the same functional sequences in the beta fibrinogen gene promoter as HNF-1.

The EMBO journal ·Vol. 7 ·No. 8 ·1988-08-00 ·Pages 2485-93

Baumhueter S, Courtois G, Crabtree GR

Abstract

Normal liver and differentiated hepatoma cell lines contain a nuclear factor, HNF-1, which binds functional sequences within the promoters of the alpha and beta chains of fibrinogen and alpha 1-antitrypsin. In UV cross-linking studies we find that HNF-1 has an apparent mol. wt of 92 kd in differentiated hepatocytes. Nuclear extracts from a dedifferentiated hepatoma cell line, Fao flC2 (C2), selected on the basis of morphological and biochemical dedifferentiation from Fao contains a protein, vHNF, which binds to the same DNA sequence motif as HNF-1 but has an apparent mol. wt of 72 rather than 92 kd. Mixing experiments indicate that this variant nuclear factor does not arise from HNF-1 by proteolysis. Reversion to the differentiated phenotype in C2-Rev7 (Rev7), selected by growth in glucose-free media, results in the re-expression of many liver-specific functions including the fibrinogen genes. In Rev7, HNF-1 is indistinguishable from that in the original differentiated cell line Fao. Transfection studies and nuclear run-on experiments indicate that reduced expression of fibrinogen RNA in C2 relative to Fao is related to reduced transcription. vHNF but not HNF-1 is present in somatic hybrids between fibroblasts and liver cells which show extinction of liver specific traits and it can also be detected in normal tissue, predominantly in lung nuclear extracts. Since vHNF and HNF-1 are not co-expressed yet correlate with the non-hepatic and hepatic phenotype, respectively, we suggest that the expression of these variant forms reflects determination events in establishing the hepatic phenotype.

MeSH Terms
Animals Carcinoma, Hepatocellular DNA/metabolism Fibrinogen/genetics Gene Expression Regulation Hybrid Cells Liver Neoplasms Molecular Weight Nuclear Proteins/genetics,metabolism Promoter Regions, Genetic RNA, Messenger/genetics Rats Transcription Factors/genetics Transcription, Genetic Transfection Tumor Cells, Cultured
Chemicals
Nuclear Proteins RNA, Messenger Transcription Factors Fibrinogen DNA
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Baumhueter S
Department of Pathology, Stanford University School of Medicine, CA 94305.
Courtois G
Crabtree G R
References (33)
33 references, click to expand
  1. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  2. Interaction of a liver-specific nuclear factor with the fibrinogen and alpha 1-antitrypsin promoters.
    Science. 1987 Oct 30;238(4827):688-92 PMID: 3499668
  3. A selective system for hepatoma cells producing gluconeogenic enzymes.
    Somatic Cell Genet. 1977 Jul;3(4):365-80 PMID: 203052
  4. Expression of differentiated functions in hepatoma cell hybrids: selection in glucose-free media of segregated hybrid cells which reexpress gluconeogenic enzymes.
    Somatic Cell Genet. 1977 Nov;3(6):579-602 PMID: 203053
  5. DNAse footprinting: a simple method for the detection of protein-DNA binding specificity.
    Nucleic Acids Res. 1978 Sep;5(9):3157-70 PMID: 212715
  6. Identification and purification of a human lymphoid-specific octamer-binding protein (OTF-2) that activates transcription of an immunoglobulin promoter in vitro.
    Cell. 1987 Dec 4;51(5):783-93 PMID: 3119226
  7. Purification and characterization of chicken ovalbumin gene upstream promoter transcription factor from homologous oviduct cells.
    Mol Cell Biol. 1987 Dec;7(12):4151-8 PMID: 3437886
  8. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.
    Biochemistry. 1979 Nov 27;18(24):5294-9 PMID: 518835
  9. Contacts between Escherichia coli RNA polymerase and an early promoter of phage T7.
    Proc Natl Acad Sci U S A. 1980 Jan;77(1):122-6 PMID: 6987648
  10. Dedifferentiated variants of a rat hepatoma: analysis by cell hybridization.
    Somatic Cell Genet. 1979 Nov;5(6):697-718 PMID: 545720
  11. Dedifferentiated variants of a rat hepatoma:reversion analysis.
    Cell. 1980 Apr;19(4):1043-51 PMID: 6247070
  12. Analysis of transcriptional regulatory signals of the HSV thymidine kinase gene: identification of an upstream control region.
    Cell. 1981 Aug;25(2):385-98 PMID: 6269744
  13. Molecular cloning of cDNA for the alpha, beta, and gamma chains of rat fibrinogen. A family of coordinately regulated genes.
    J Biol Chem. 1981 Sep 25;256(18):9718-23 PMID: 6169715
  14. Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis.
    Nucleic Acids Res. 1981 Dec 11;9(23):6505-25 PMID: 6275366
  15. Potential basis for regulation of the coordinately expressed fibrinogen genes: homology in the 5' flanking regions.
    Proc Natl Acad Sci U S A. 1984 Apr;81(8):2313-6 PMID: 6232608
  16. A genetic analysis of extinction: trans-dominant loci regulate expression of liver-specific traits in hepatoma hybrid cells.
    Cell. 1984 Sep;38(2):523-34 PMID: 6147198
  17. Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.
    Nucleic Acids Res. 1984 Sep 25;12(18):7035-56 PMID: 6091052
  18. Functional messenger RNAs are produced by SP6 in vitro transcription of cloned cDNAs.
    Nucleic Acids Res. 1984 Sep 25;12(18):7057-70 PMID: 6207484
  19. Tissue-specific expression is conferred by a sequence from the 5' end of the rat albumin gene.
    EMBO J. 1984 Nov;3(11):2505-10 PMID: 6096126
  20. Control of eukaryotic messenger RNA synthesis by sequence-specific DNA-binding proteins.
    Nature. 1985 Aug 29-Sep 4;316(6031):774-8 PMID: 4041012
  21. A nuclear factor that binds to a conserved sequence motif in transcriptional control elements of immunoglobulin genes.
    Nature. 1986 Jan 9-15;319(6049):154-8 PMID: 3079885
  22. Sequence-specific interactions of nuclear factors with the insulin gene enhancer.
    Cell. 1986 Apr 11;45(1):35-44 PMID: 3006925
  23. Liver-specific RNA metabolism in hepatoma cells: variations in transcription rates and mRNA levels.
    Mol Cell Biol. 1985 Oct;5(10):2633-41 PMID: 3841793
  24. A cellular DNA-binding protein that activates eukaryotic transcription and DNA replication.
    Cell. 1987 Jan 16;48(1):79-89 PMID: 3024847
  25. A single polypeptide possesses the binding and transcription activities of the adenovirus major late transcription factor.
    Mol Cell Biol. 1986 Dec;6(12):4723-33 PMID: 3796614
  26. A genetic analysis of extinction: trans-regulation of 16 liver-specific genes in hepatoma-fibroblast hybrid cells.
    Proc Natl Acad Sci U S A. 1987 Mar;84(6):1614-8 PMID: 2882508
  27. Regulation of inducible and tissue-specific gene expression.
    Science. 1987 Jun 5;236(4806):1237-45 PMID: 3296191
  28. A transcriptional repressor encoded by BPV-1 shares a common carboxy-terminal domain with the E2 transactivator.
    Cell. 1987 Jul 3;50(1):69-78 PMID: 3036366
  29. A pituitary-specific trans-acting factor can stimulate transcription from the growth hormone promoter in extracts of nonexpressing cells.
    Cell. 1987 Jul 17;50(2):267-75 PMID: 3594572
  30. Factors involved in control of tissue-specific expression of albumin gene.
    Cell. 1987 Aug 14;50(4):627-38 PMID: 3607880
  31. Hepatoma variants (C2) are defective for transcriptional and post-transcriptional actions from both endogenous and viral genomes.
    EMBO J. 1987 Jun;6(6):1727-31 PMID: 2956094
  32. Induction of fibrinogen and a subset of acute phase response genes involves a novel monokine which is mimicked by phorbol esters.
    J Biol Chem. 1987 Aug 5;262(22):10850-4 PMID: 2440878
  33. Contacts between the lac repressor and the thymines in the lac operator.
    Proc Natl Acad Sci U S A. 1977 Nov;74(11):4973-6 PMID: 270732
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1988-08-00
Pages
2485-93
Language
English
Region
England
NLM ID
8208664
PMCID
PMC457118
Subset
IM
Grants
NCI NIH HHS · CA39612 · United States
NHLBI NIH HHS · HL33942 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]