Home LiteratureArticle Details
PMID: 28821181 Published · ppublish English Journal Article Review Research Support, Non-U.S. Gov't

Conservation Genetics of the Cheetah: Lessons Learned and New Opportunities.

The Journal of heredity ·Vol. 108 ·No. 6 ·2017-00-01 ·Pages 671-677

O'Brien SJ, Johnson WE, Driscoll CA, Dobrynin P, Marker L

Abstract

The dwindling wildlife species of our planet have become a cause célèbre for conservation groups, governments, and concerned citizens throughout the world. The application of powerful new genetic technologies to surviving populations of threatened mammals has revolutionized our ability to recognize hidden perils that afflict them. We have learned new lessons of survival, adaptation, and evolution from viewing the natural history of genomes in hundreds of detailed studies. A single case history of one species, the African cheetah, Acinonyx jubatus, is here reviewed to reveal a long-term story of conservation challenges and action informed by genetic discoveries and insights. A synthesis of 3 decades of data, interpretation, and controversy, capped by whole genome sequence analysis of cheetahs, provides a compelling tale of conservation relevance and action to protect this species and other threatened wildlife.

Keywords
Acinonyx jubatus Cheetah genome Indian Cheetah population bottleneck
MeSH Terms
Acinonyx/genetics Animals Animals, Wild/genetics Conservation of Natural Resources Genetic Variation Genetics, Population Genome
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
O'Brien Stephen J
Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russia; Guy Harvey Oceanographic Center, Halmos College of Natural Sciences and Oceanography, Nova Southeastern University, Ft Lauderdale, FL; Smithsonian Conservation Biology Institute, National Zoological Park, Front Royal, VA; Laboratory of Neurogenetics, NIAAA, Rockville, MD; and Cheetah Conservation Fund, Otjiwarongo, Namibia.
Johnson Warren E
Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russia; Guy Harvey Oceanographic Center, Halmos College of Natural Sciences and Oceanography, Nova Southeastern University, Ft Lauderdale, FL; Smithsonian Conservation Biology Institute, National Zoological Park, Front Royal, VA; Laboratory of Neurogenetics, NIAAA, Rockville, MD; and Cheetah Conservation Fund, Otjiwarongo, Namibia.
Driscoll Carlos A
Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russia; Guy Harvey Oceanographic Center, Halmos College of Natural Sciences and Oceanography, Nova Southeastern University, Ft Lauderdale, FL; Smithsonian Conservation Biology Institute, National Zoological Park, Front Royal, VA; Laboratory of Neurogenetics, NIAAA, Rockville, MD; and Cheetah Conservation Fund, Otjiwarongo, Namibia.
Dobrynin Pavel
Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russia; Guy Harvey Oceanographic Center, Halmos College of Natural Sciences and Oceanography, Nova Southeastern University, Ft Lauderdale, FL; Smithsonian Conservation Biology Institute, National Zoological Park, Front Royal, VA; Laboratory of Neurogenetics, NIAAA, Rockville, MD; and Cheetah Conservation Fund, Otjiwarongo, Namibia.
Marker Laurie
Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russia; Guy Harvey Oceanographic Center, Halmos College of Natural Sciences and Oceanography, Nova Southeastern University, Ft Lauderdale, FL; Smithsonian Conservation Biology Institute, National Zoological Park, Front Royal, VA; Laboratory of Neurogenetics, NIAAA, Rockville, MD; and Cheetah Conservation Fund, Otjiwarongo, Namibia.
References (30)
30 references, click to expand
  1. Population genetics. The cheetah controversy.
    Nature. 1995 Mar 23;374(6520):309-10 PMID: 7885465
  2. Prevalence and implications of feline coronavirus infections of captive and free-ranging cheetahs (Acinonyx jubatus).
    J Virol. 1990 May;64(5):1964-72 PMID: 2157864
  3. Ecological and genetic factors in conservation: a cautionary tale.
    Science. 1994 Jan 28;263(5146):485-6 PMID: 8290956
  4. A genomic history of Aboriginal Australia.
    Nature. 2016 Oct 13;538(7624):207-214 PMID: 27654914
  5. Dating the genetic bottleneck of the African cheetah.
    Proc Natl Acad Sci U S A. 1993 Apr 15;90(8):3172-6 PMID: 8475057
  6. Molecular evidence for species-level distinctions in clouded leopards.
    Curr Biol. 2006 Dec 5;16(23):2371-6 PMID: 17141620
  7. The late Miocene radiation of modern Felidae: a genetic assessment.
    Science. 2006 Jan 6;311(5757):73-7 PMID: 16400146
  8. Coronavirus outbreak in cheetahs: lessons for SARS.
    Curr Biol. 2004 Mar 23;14(6):R227-8 PMID: 15043830
  9. Genomic differentiation among natural populations of orang-utan (Pongo pygmaeus).
    Curr Biol. 1996 Oct 1;6(10):1326-36 PMID: 8939569
  10. DNA variation of the mammalian major histocompatibility complex reflects genomic diversity and population history.
    Proc Natl Acad Sci U S A. 1990 Jan;87(2):836-40 PMID: 1967831
  11. Genomic analyses inform on migration events during the peopling of Eurasia.
    Nature. 2016 Oct 13;538(7624):238-242 PMID: 27654910
  12. Big cat genomics.
    Annu Rev Genomics Hum Genet. 2005;6:407-29 PMID: 16124868
  13. Genetic basis for species vulnerability in the cheetah.
    Science. 1985 Mar 22;227(4693):1428-34 PMID: 2983425
  14. Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term geographic isolates.
    Mol Ecol. 2011 Feb;20(4):706-24 PMID: 21214655
  15. Clouded leopard phylogeny revisited: support for species recognition and population division between Borneo and Sumatra.
    Front Zool. 2007 May 29;4:15 PMID: 17535420
  16. The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.
    Nature. 2016 Oct 13;538(7624):201-206 PMID: 27654912
  17. Phylogenetics, genome diversity and origin of modern leopard, Panthera pardus.
    Mol Ecol. 2001 Nov;10(11):2617-33 PMID: 11883877
  18. Genetics and demography in biological conservation.
    Science. 1988 Sep 16;241(4872):1455-60 PMID: 3420403
  19. Annotated features of domestic cat - Felis catus genome.
    Gigascience. 2014 Aug 05;3:13 PMID: 25143822
  20. Response to Comment by Faurby, Werdelin and Svenning.
    Genome Biol. 2016 May 05;17:90 PMID: 27150130
  21. Phylogeography and genetic ancestry of tigers (Panthera tigris).
    PLoS Biol. 2004 Dec;2(12):e442 PMID: 15583716
  22. The evolutionary dynamics of the lion Panthera leo revealed by host and viral population genomics.
    PLoS Genet. 2008 Nov;4(11):e1000251 PMID: 18989457
  23. Ejaculate traits in the Namibian cheetah (Acinonyx jubatus): influence of age, season and captivity.
    Reprod Fertil Dev. 2007;19(2):370-82 PMID: 17257524
  24. The global decline of cheetah Acinonyx jubatus and what it means for conservation.
    Proc Natl Acad Sci U S A. 2017 Jan 17;114(3):528-533 PMID: 28028225
  25. Conservation genetics.
    Annu Rev Genet. 1995;29:305-27 PMID: 8825477
  26. The cheetah is depauperate in genetic variation.
    Science. 1983 Jul 29;221(4609):459-62 PMID: 17755482
  27. The difference between trivial and scientific names: There were never any true cheetahs in North America.
    Genome Biol. 2016 May 05;17:89 PMID: 27150269
  28. Genomic legacy of the African cheetah, Acinonyx jubatus.
    Genome Biol. 2015 Dec 10;16:277 PMID: 26653294
  29. Molecular genetic divergence of orang utan (Pongo pygmaeus) subspecies based on isozyme and two-dimensional gel electrophoresis.
    J Hered. 1990 Sep-Oct;81(5):375-87 PMID: 2230076
  30. Genetic restoration of the Florida panther.
    Science. 2010 Sep 24;329(5999):1641-5 PMID: 20929847
Article Info
Journal
The Journal of heredity
Abbr.
J Hered
ISSN
1465-7333
Published
2017-00-01
Pages
671-677
Language
English
Region
United States
NLM ID
0375373
PMCID
PMC5892392
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]