Home LiteratureArticle Details
PMID: 2993817 Published · ppublish English Journal Article

ISL1: a new transposable element in Lactobacillus casei.

Molecular & general genetics : MGG ·Vol. 200 ·No. 2 ·1985-00-00 ·Pages 193-8

Shimizu-Kadota M, Kiwaki M, Hirokawa H, Tsuchida N

Abstract

The genome structures of a temperate Lactobacillus phage, phi FSW, and its virulent mutants, phi FSVs, were examined by restriction, heteroduplex and nucleotide-sequence analyses. The results showed that two out of three phi FSVs had the same 1.3 kbp insertion (designated as ISL1) at different positions in the phi FSW sequence. ISL1 was 1,256 bp long and contained at least two long open reading frames of 279 and 822 bases on one strand. Inverted repeats were found at the termini of the ISL1 which was bracketed by 3 bp direct repeats of the phi FSW sequence. From this evidence, we concluded that ISL1 was a transposable element in Lactobacillus casei.

MeSH Terms
Bacteriophages/genetics Base Composition Base Sequence Cloning, Molecular DNA Restriction Enzymes DNA Transposable Elements Genes, Bacterial Genes, Viral Lactobacillus casei/genetics Microscopy, Electron
Chemicals
DNA Transposable Elements DNA Restriction Enzymes
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Shimizu-Kadota M
Kiwaki M
Hirokawa H
Tsuchida N
References (28)
28 references, click to expand
  1. Regulatory sequences involved in the promotion and termination of RNA transcription.
    Annu Rev Genet. 1979;13:319-53 PMID: 94251
  2. Cloning the Gene for the Malolactic Fermentation of Wine from Lactobacillus delbrueckii in Escherichia coli and Yeasts.
    Appl Environ Microbiol. 1984 Feb;47(2):288-93 PMID: 16346469
  3. Cloning and expression of the beta-D-phosphogalactoside galactohydrolase gene of Lactobacillus casei in Escherichia coli K-12.
    J Bacteriol. 1982 Dec;152(3):1138-46 PMID: 6292163
  4. Genetic and DNA sequence analysis of the kanamycin resistance transposon Tn903.
    Proc Natl Acad Sci U S A. 1980 Dec;77(12):7176-80 PMID: 6261245
  5. Nucleotide sequence of the transposable element IS15.
    Gene. 1984 Oct;30(1-3):113-20 PMID: 6096209
  6. Transposable elements in prokaryotes.
    Annu Rev Genet. 1981;15:341-404 PMID: 6279020
  7. Nucleotide sequence of the transposable DNA-element IS2.
    Nucleic Acids Res. 1979 Mar;6(3):1111-22 PMID: 375194
  8. Molecular cloning of the gene for dihydrofolate reductase from Lactobacillus casei.
    Gene. 1982 Feb;17(2):229-33 PMID: 6282715
  9. Translational initiation in prokaryotes.
    Annu Rev Microbiol. 1981;35:365-403 PMID: 6170248
  10. Nucleotide sequence of IS26, a new prokaryotic mobile genetic element.
    Nucleic Acids Res. 1983 Sep 24;11(18):6319-30 PMID: 6312419
  11. The nucleotide sequence and protein-coding capability of the transposable element IS5.
    Gene. 1981 Aug;14(3):155-63 PMID: 6269958
  12. A new and improved method for 3'-end labelling DNA using [alpha-32P]ddATP.
    Gene. 1984 Mar;27(3):309-13 PMID: 6735176
  13. The nucleotide sequence of IS5 from Escherichia coli.
    Gene. 1981 Aug;14(3):165-74 PMID: 6269959
  14. Nucleotide sequence of the kanamycin resistance transposon Tn903.
    J Mol Biol. 1981 Apr 5;147(2):217-26 PMID: 6270337
  15. Prophage Origin of a Virulent Phage Appearing on Fermentations of Lactobacillus casei S-1.
    Appl Environ Microbiol. 1983 Feb;45(2):669-74 PMID: 16346214
  16. Enhanced graphic matrix analysis of nucleic acid and protein sequences.
    Proc Natl Acad Sci U S A. 1981 Dec;78(12):7665-9 PMID: 6801656
  17. Structure of the archaebacterial transposable element ISH50.
    Nucleic Acids Res. 1983 Jun 25;11(12):4195-9 PMID: 6306577
  18. High-frequency spontaneous mutation in the bacterio-opsin gene in Halobacterium halobium is mediated by transposable elements.
    Proc Natl Acad Sci U S A. 1983 Apr;80(8):2201-5 PMID: 6300900
  19. Complete sequence of an IS element present in pSC101.
    Nucleic Acids Res. 1981 Jun 25;9(12):2905-11 PMID: 6269064
  20. A transposable element from Halobacterium halobium which inactivates the bacteriorhodopsin gene.
    Proc Natl Acad Sci U S A. 1982 Dec;79(23):7268-72 PMID: 6296826
  21. Structural analysis of Tn5.
    Cold Spring Harb Symp Quant Biol. 1981;45 Pt 1:107-13 PMID: 6271452
  22. Nucleotide sequence of an insertion element, IS1.
    Proc Natl Acad Sci U S A. 1978 Feb;75(2):615-9 PMID: 273224
  23. Physical mapping of the virion and the prophage DNAs of a temperate Lactobacillus phage phi FSW.
    J Gen Microbiol. 1984 Feb;130(2):423-30 PMID: 6327881
  24. Prophage Curing in Lactobacillus casei by Isolation of a Thermoinducible Mutant.
    Appl Environ Microbiol. 1982 Jun;43(6):1284-7 PMID: 16346028
  25. The sequence of IS4.
    Mol Gen Genet. 1981;181(2):169-75 PMID: 6268937
  26. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  27. DNA sequence organization of IS10-right of Tn10 and comparison with IS10-left.
    Proc Natl Acad Sci U S A. 1982 Apr;79(8):2608-12 PMID: 6283536
  28. Overproduction of staphylokinase in Escherichia coli and its characterization.
    Eur J Biochem. 1985 Jun 18;149(3):557-63 PMID: 3891339
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1985-00-00
Pages
193-8
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
Databases
GENBANK
X02734
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]