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PMID: 3023920 Published · ppublish English Journal Article

Inverted duplication-transposition event in mammalian cells at an illegitimate recombination join.

Molecular and cellular biology ·Vol. 6 ·No. 6 ·1986-06-00 ·Pages 2179-84

Williams TJ, Fried M

Abstract

Illegitimate recombination events in mammalian cells often contain extraneous nucleotides or filler DNA at the recombinant joins. The polyomavirus-transformed cell line 7axB has previously been found to contain 37 base pairs (bp) of filler DNA at one virus-host join of the single insert of integrated viral DNA (A. Hayday, H. E. Ruley, and M. Fried, J. Virol. 44:67-77, 1982). By using a synthetic oligomer of these 37 bp as a probe, we demonstrated that this filler DNA is an inverted duplication of a single-copy rat sequence found 650 bp upstream from this virus-host join. The other virus-host join appears to be the result of a simple illegitimate recombination event between viral and host sequences. This is the first identification of filler DNA as a transposed copy of a chromosomal sequence. The relevance of the recombination events studied to cellular rearrangements and viral integration is discussed.

MeSH Terms
Animals Base Sequence Polyomavirus/genetics Rats Recombination, Genetic
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Williams T J
Fried M
References (23)
23 references, click to expand
  1. The t(14;18) chromosome translocations involved in B-cell neoplasms result from mistakes in VDJ joining.
    Science. 1985 Sep 27;229(4720):1390-3 PMID: 3929382
  2. Structural organization of the bcr gene and its role in the Ph' translocation.
    Nature. 1985 Jun 27-Jul 3;315(6022):758-61 PMID: 2989703
  3. A Chinese G gamma + (A gamma delta beta)zero thalassemia deletion: comparison to other deletions in the human beta-globin gene cluster and sequence analysis of the breakpoints.
    Nucleic Acids Res. 1985 Sep 25;13(18):6559-75 PMID: 2997715
  4. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  5. Integration and excision of SV40 DNA from the chromosome of a transformed cell.
    Cell. 1980 May;20(1):143-52 PMID: 6248231
  6. Recombination in SV40-infected cells: viral DNA sequences at sites of circularization of transfecting linear DNA.
    Virology. 1981 Mar;109(2):353-65 PMID: 6259817
  7. DNA sequence homology and chromosomal deletion at a site of SV40 DNA integration.
    Nature. 1982 Mar 25;296(5855):363-6 PMID: 6278325
  8. Multiple immunoglobulin heavy-chain gene transcripts in Abelson murine leukemia virus-transformed lymphoid cell lines.
    Mol Cell Biol. 1982 Apr;2(4):386-400 PMID: 6810096
  9. Joining of immunoglobulin heavy chain gene segments: implications from a chromosome with evidence of three D-JH fusions.
    Proc Natl Acad Sci U S A. 1982 Jul;79(13):4118-22 PMID: 6287467
  10. Structural and biological analysis of integrated polyoma virus DNA and its adjacent host sequences cloned from transformed rat cells.
    J Virol. 1982 Oct;44(1):67-77 PMID: 6292505
  11. Somatic cells efficiently join unrelated DNA segments end-to-end.
    Mol Cell Biol. 1982 Oct;2(10):1258-69 PMID: 6294502
  12. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.
    Gene. 1982 Oct;19(3):269-76 PMID: 6295880
  13. Duplication followed by deletion accounts for the structure of an Indian deletion beta (0)-thalassemia gene.
    Nucleic Acids Res. 1982 Dec 20;10(24):8025-9 PMID: 7162987
  14. An inverted sea urchin histone gene sequence with breakpoints between TATA boxes and mRNA cap sites.
    Nucleic Acids Res. 1983 Apr 11;11(7):2135-53 PMID: 6300794
  15. Clustered illegitimate recombination events in mammalian cells involving very short sequence homologies.
    Nature. 1983 Jul 14-20;304(5922):181-4 PMID: 6306477
  16. A pattern of partially homologous recombination in mouse L cells.
    Proc Natl Acad Sci U S A. 1984 Jan;81(1):206-10 PMID: 6320165
  17. Translocation of the myc cellular oncogene to the immunoglobulin heavy chain locus in murine plasmacytomas is an imprecise reciprocal exchange.
    Cell. 1984 Apr;36(4):973-82 PMID: 6323031
  18. DNA sequence studies of simian virus 40 chromosomal excision and integration in rat cells.
    J Mol Biol. 1984 Mar 25;174(1):55-84 PMID: 6325709
  19. A conserved sequence at c-myc oncogene chromosomal translocation breakpoints in plasmacytomas.
    Nature. 1984 Jul 26-Aug 1;310(5975):327-30 PMID: 6462219
  20. Insertion of N regions into heavy-chain genes is correlated with expression of terminal deoxytransferase in B cells.
    Nature. 1984 Oct 25-31;311(5988):752-5 PMID: 6092963
  21. Clustering of breakpoints on chromosome 11 in human B-cell neoplasms with the t(11;14) chromosome translocation.
    Nature. 1985 May 23-29;315(6017):340-3 PMID: 3923362
  22. Analysis of an inversion within the human beta globin gene cluster.
    Nucleic Acids Res. 1985 Apr 25;13(8):2897-906 PMID: 4000967
  23. Oncogene chromosome breakpoints and alu sequences.
    Nature. 1985 Oct 10-16;317(6037):559 PMID: 2995838
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1986-06-00
Pages
2179-84
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC367758
Subset
IM
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