Home LiteratureArticle Details
PMID: 3045247 Published · ppublish English Journal Article

Mutational hot spots in Ig V region genes of human follicular lymphomas.

The Journal of experimental medicine ·Vol. 168 ·No. 2 ·1988-08-01 ·Pages 475-89

Levy S, Mendel E, Kon S, Avnur Z, Levy R

Abstract

The genes coding for the Ig light chains expressed in two cases of human follicular lymphoma were cloned and sequenced. In each case, multiple independent isolates of the tumor population were compared. Although each tumor represented a single clone of B cells with a unique V/J joint, different cells within each tumor had accumulated multiple point mutations in the V gene during clonal expansion. Most of the mutations observed were silent, but some resulted in amino acid replacements. Identical silent mutations were often observed in independent isolates of each tumor. By combining the current data with VH sequences obtained previously from the same cells, it was apparent that the repetitive silent mutations could not be explained solely by a genealogic tree. Such mutations could represent hot spots whose tendency to mutate may be influenced by neighboring DNA sequences or by the methylation of specific cytosine residues.

MeSH Terms
Amino Acid Sequence Base Sequence Cell Line Cloning, Molecular DNA, Neoplasm/genetics Gene Amplification Genes, Immunoglobulin Humans Immunoglobulin Variable Region/genetics Lymphoma, Follicular/genetics,immunology Molecular Sequence Data Mutation RNA, Neoplasm/genetics,isolation & purification Tumor Cells, Cultured/immunology
Chemicals
DNA, Neoplasm Immunoglobulin Variable Region RNA, Neoplasm
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Levy S
Division of Oncology, Stanford University School of Medicine, California 94305.
Mendel E
Kon S
Avnur Z
Levy R
References (34)
34 references, click to expand
  1. Screening lambdagt recombinant clones by hybridization to single plaques in situ.
    Science. 1977 Apr 8;196(4286):180-2 PMID: 322279
  2. Derivation of specific antibody-producing tissue culture and tumor lines by cell fusion.
    Eur J Immunol. 1976 Jul;6(7):511-9 PMID: 825377
  3. Rescue of immunoglobulin secretion from human neoplastic lymphoid cells by somatic cell hybridization.
    Proc Natl Acad Sci U S A. 1978 May;75(5):2411-5 PMID: 97669
  4. Molecular basis of base substitution hotspots in Escherichia coli.
    Nature. 1978 Aug 24;274(5673):775-80 PMID: 355893
  5. Immunoglobulin secretion by mouse X human hybridomas: an approach for the production of anti-idiotype reagents useful in monitoring patients with B cell lymphoma.
    J Immunol. 1980 Sep;125(3):1037-43 PMID: 6967886
  6. Cloned human and mouse kappa immunoglobulin constant and J region genes conserve homology in functional segments.
    Cell. 1980 Nov;22(1 Pt 1):197-207 PMID: 6775818
  7. Evolution of human immunoglobulin kappa J region genes.
    J Biol Chem. 1982 Feb 10;257(3):1516-22 PMID: 6276389
  8. Patterns of nucleotide substitution in pseudogenes and functional genes.
    J Mol Evol. 1982;18(5):360-9 PMID: 7120431
  9. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.
    Anal Biochem. 1983 Jul 1;132(1):6-13 PMID: 6312838
  10. Lambda replacement vectors carrying polylinker sequences.
    J Mol Biol. 1983 Nov 15;170(4):827-42 PMID: 6315951
  11. Generation of antibody diversity in the immune response of BALB/c mice to influenza virus hemagglutinin.
    Proc Natl Acad Sci U S A. 1984 May;81(10):3180-4 PMID: 6203114
  12. Inter- and intraclonal diversity in the antibody response to influenza hemagglutinin.
    J Exp Med. 1985 Apr 1;161(4):687-704 PMID: 3920342
  13. Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications.
    J Mol Evol. 1984;21(1):58-71 PMID: 6442359
  14. Emergence of idiotype variants during treatment of B-cell lymphoma with anti-idiotype antibodies.
    N Engl J Med. 1985 Jun 27;312(26):1658-65 PMID: 3923352
  15. Clustering of extensive somatic mutations in the variable region of an immunoglobulin heavy chain gene from a human B cell lymphoma.
    Cell. 1986 Jan 17;44(1):97-106 PMID: 3079673
  16. Somatic evolution of variable region structures during an immune response.
    Proc Natl Acad Sci U S A. 1986 Mar;83(6):1847-51 PMID: 3485290
  17. Mouse x human heterohybridomas as fusion partners with human B cell tumors.
    J Immunol Methods. 1986 May 1;89(1):61-72 PMID: 3084658
  18. Structural and functional implications of a restricted antibody response to a defined antigenic region on the influenza virus hemagglutinin.
    EMBO J. 1986 Jul;5(7):1577-87 PMID: 2427335
  19. Idiotype variant cell populations in patients with B cell lymphoma.
    J Exp Med. 1986 Nov 1;164(5):1566-80 PMID: 3490533
  20. Differentiation-linked leukemogenesis in lymphocytes.
    Science. 1986 Nov 7;234(4777):697-704 PMID: 3535067
  21. Clonal recruitment and somatic mutation in the generation of immunological memory to the hapten NP.
    EMBO J. 1986 Oct;5(10):2459-68 PMID: 2430792
  22. Analysis of somatic mutation and class switching in naive and memory B cells generating adoptive primary and secondary responses.
    Cell. 1987 Mar 13;48(5):757-70 PMID: 3493076
  23. Human lambda light chain locus: organization and DNA sequences of three genomic J regions.
    Immunogenetics. 1987;25(1):63-70 PMID: 3102359
  24. Patterns of somatic mutations in immunoglobulin variable genes.
    Genetics. 1987 Jan;115(1):169-76 PMID: 3557109
  25. Role of chromosome translocations in human neoplasia.
    Cell. 1987 Apr 24;49(2):155-6 PMID: 3494520
  26. Somatic evolution of diversity among anti-phosphocholine antibodies induced with Proteus morganii.
    J Immunol. 1987 May 1;138(9):3060-8 PMID: 3106498
  27. Mutation drift and repertoire shift in the maturation of the immune response.
    Immunol Rev. 1987 Apr;96:23-41 PMID: 3298007
  28. Somatic mutation in anti-phosphorylcholine antibodies.
    Immunol Rev. 1987 Apr;96:59-74 PMID: 3298010
  29. Retention of an idiotypic determinant in a human B-cell lymphoma undergoing immunoglobulin variable-region mutation.
    Proc Natl Acad Sci U S A. 1987 Jul;84(14):5053-7 PMID: 3496601
  30. A rapid method for cloning and sequencing variable-region genes of expressed immunoglobulins.
    Gene. 1987;54(2-3):167-73 PMID: 3653692
  31. HLA-DQ beta gene contributes to susceptibility and resistance to insulin-dependent diabetes mellitus.
    Nature. 1987 Oct 15-21;329(6140):599-604 PMID: 3309680
  32. Evolutionary and somatic selection of the antibody repertoire in the mouse.
    Science. 1987 Nov 20;238(4830):1088-94 PMID: 3317826
  33. Purification of biologically active globin messenger RNA by chromatography on oligothymidylic acid-cellulose.
    Proc Natl Acad Sci U S A. 1972 Jun;69(6):1408-12 PMID: 4504350
  34. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
Article Info
Journal
The Journal of experimental medicine
Abbr.
J Exp Med
ISSN
0022-1007
Published
1988-08-01
Pages
475-89
Language
English
Region
United States
NLM ID
2985109R
PMCID
PMC2188990
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]