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PMID: 3054117 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Global variation in G+C content along vertebrate genome DNA. Possible correlation with chromosome band structures.

Journal of molecular biology ·Vol. 203 ·No. 1 ·1988-09-05 ·Pages 1-13

Ikemura T, Aota S

Abstract

The global, rather than local, variation in G+C content along the nuclear DNA sequences of various organisms was studied using GenBank sequence data. When long DNA sequences of the genomes of Escherichia coli and Saccharomyces cerevisiae were examined, the levels of their G+C content (G+C%) were found to be within a narrow range around that of the whole genome. The G+C% levels for sequences of vertebrate genomes, however, were found to cover a wide range, showing that their genome is a mosaic of sequences with different G+C% levels, in each of which the sequence is fairly homogeneous in its G+C% for a very long distance. Through surveying a human genetic map and GenBank DNA sequences, the global variations in G+C% along the human genome DNA were found to be correlated with chromosome band structures.

MeSH Terms
Animals Base Sequence Chromosome Banding Codon Cytosine/analysis DNA/genetics DNA, Bacterial/genetics Escherichia coli Globins Guanine/analysis Humans Major Histocompatibility Complex Mice Multigene Family Rabbits Saccharomyces cerevisiae
Chemicals
Codon DNA, Bacterial Guanine Cytosine Globins DNA
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Ikemura T
DNA Research Center, National Institute of Genetics, Shizuoka-ken, Japan.
Aota S
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
0022-2836
Published
1988-09-05
Pages
1-13
Language
English
Region
England
NLM ID
2985088R
Subset
IM
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