Home LiteratureArticle Details
PMID: 3081305 Published · ppublish English Journal Article

Chromosome distribution of intracisternal A-particle sequences in the Syrian hamster and mouse.

Chromosoma ·Vol. 93 ·No. 3 ·1986-00-00 ·Pages 213-9

Kuff EL, Fewell JE, Lueders KK, DiPaolo JA, Amsbaugh SC, Popescu NC

Abstract

Metaphase chromosomes of Syrian hamster and BALB/c mice were hybridized in situ with radiolabeled probes derived from cloned intracisternal A-particle (IAP) genes of the corresponding species. The DNAs of these species are known to contain about 900 and 1,000 copies, respectively, of the retrovirus-like IAP sequence elements per haploid genome. Multiple IAP sequences were found on all chromosomes of both hamster and mouse. In the hamster, more than half of the IAP sequences were located in regions of non-centromeric constitutive heterochromatin, at an average concentration per unit chromosome length 5 times greater than in the euchromatic regions. The other dispersed sequences showed marked local variations in concentration along the chromosome lengths; both discrete foci and large grain clusters were observed as well as regions apparently lacking IAP sequences. Within the resolution of the techniques, IAP sequences appeared to be more evenly distributed over the mouse chromosomes; however, some prominent variations in concentration were seen. The number of potentially active IAP genes in the Syrian hamster, and by extension in the mouse, may be restricted by the preferential location of IAP sequences in genetically inert regions of the genome.

MeSH Terms
Animals Base Sequence Chromosomes/ultrastructure Cricetinae Embryo, Mammalian Female Fetus Genes, Intracisternal A-Particle Karyotyping Male Mesocricetus Metaphase Mice Mice, Inbred BALB C Nucleic Acid Hybridization Pregnancy Proto-Oncogenes Skin/cytology Species Specificity
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Kuff E L
Fewell J E
Lueders K K
DiPaolo J A
Amsbaugh S C
Popescu N C
References (41)
41 references, click to expand
  1. Functional aspects of satellite DNA and heterochromatin.
    Int Rev Cytol. 1979;58:1-114 PMID: 391760
  2. Molecular arrangement and evolution of heterochromatic DNA.
    Annu Rev Genet. 1980;14:121-44 PMID: 6260016
  3. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  4. Retrovirus-like particles containing RNA homologous to the transposable element copia in Drosophila melanogaster.
    Nature. 1983 Mar 10;302(5904):119-24 PMID: 6186922
  5. Rearranged c-mos locus in a MOPC 21 murine myeloma cell line and its persistence in hybridomas.
    Nature. 1983 Dec 22-1984 Jan 4;306(5945):795-6 PMID: 6656882
  6. Sequences homologous to retrovirus-like genes of the mouse are present in multiple copies in the Syrian hamster genome.
    Nucleic Acids Res. 1981 Nov 25;9(22):5917-30 PMID: 7198224
  7. Activation of a cellular oncogene by DNA rearrangement: possible involvement of an IS-like element.
    Nature. 1982 Dec 16;300(5893):607-11 PMID: 6292737
  8. Intracisternal A-particle genes: identification in the genome of Mus musculus and comparison of multiple isolates from a mouse gene library.
    Proc Natl Acad Sci U S A. 1980 Jun;77(6):3571-5 PMID: 6251469
  9. Role of reverse transcription in the generation of extrachromosomal copia mobile genetic elements.
    Nature. 1984 Aug 9-15;310(5977):514-6 PMID: 6205279
  10. Intracisternal A particles: RNA expression and DNA methylation in murine teratocarcinoma cell lines.
    J Virol. 1983 Apr;46(1):307-10 PMID: 6827653
  11. Tumor viruses and early mouse embryos.
    Biochim Biophys Acta. 1982 Apr 29;651(2-3):105-41 PMID: 6284213
  12. Correlation of undermethylation of intracisternal A-particle genes with expression in murine plasmacytomas but not in NIH/3T3 embryo fibroblasts.
    Cancer Res. 1984 Nov;44(11):5234-41 PMID: 6091872
  13. A system of nomenclature for band patterns of mouse chromosomes.
    Chromosoma. 1973;41(2):145-58 PMID: 4120886
  14. A high resolution in situ hybridization technique for the direct visualization of labeled G-banded early metaphase and prophase chromosomes.
    Cytogenet Cell Genet. 1978;22(1-6):352-6 PMID: 752501
  15. Chromosomal interrelationship of hamster species of the genus Mesocricetus.
    Cytogenet Cell Genet. 1980;28(1-2):10-23 PMID: 7449429
  16. Intracisternal A-particle genes in Mus musculus: a conserved family of retrovirus-like elements.
    Mol Cell Biol. 1981 Mar;1(3):216-27 PMID: 6821514
  17. Localization of single copy DNA sequences of G-banded human chromosomes by in situ hybridization.
    Chromosoma. 1981;83(3):431-9 PMID: 7273954
  18. Molecular cloning of retrovirus-like genes present in multiple copies in the Syrian hamster genome.
    Nucleic Acids Res. 1982 Oct 11;10(19):5733-46 PMID: 6292848
  19. Long terminal repeat sequences of intracisternal A particle genes in the Syrian hamster genome: identification of tRNAPhe as a putative primer tRNA.
    Nucleic Acids Res. 1983 Oct 25;11(20):7169-79 PMID: 6314280
  20. Some structural and antigenic properties of intracisternal A particles occurring in mouse tumors (complement fixation-immunodiffusion-neuroblastoma-plasma-cell tumor).
    Proc Natl Acad Sci U S A. 1972 Jan;69(1):218-22 PMID: 4333040
  21. Comparison of the sequence organization of related retrovirus-like multigene families in three evolutionarily distant rodent genomes.
    Nucleic Acids Res. 1983 Jul 11;11(13):4391-408 PMID: 6306589
  22. Sequences associated with intracisternal A particles are reiterated in the mouse genome.
    Cell. 1977 Dec;12(4):963-72 PMID: 597866
  23. Banding pattern analysis of initial structural chromosome alterations induced by n-methyl-n'-nitro-n-nitrosoguanidine in Syrian hamster cells.
    Mutat Res. 1977 Sep;44(3):359-68 PMID: 561887
  24. Amplification of a specific set of intracisternal A-particle genes in a mouse plasmacytoma.
    J Virol. 1984 Jan;49(1):171-7 PMID: 6690709
  25. Male and female mouse DNAs can be discriminated using retroviral probes.
    Nature. 1982 May 20;297(5863):241-3 PMID: 7078639
  26. Chromosomal locations of two DNA segments that flank ribosomal insertion-like sequences in Drosophila: flanking sequences are mobile elements.
    Chromosoma. 1981;83(1):29-43 PMID: 6266783
  27. Identification of Syrian hamster chromosomes by acetic-saline-Giemsa (ASG) and trypsin techniques.
    Cytogenetics. 1972;11(6):500-7 PMID: 4121202
  28. Transposition of two different intracisternal A particle elements into an immunoglobulin kappa-chain gene.
    Mol Cell Biol. 1984 Dec;4(12):2565-72 PMID: 6098810
  29. Differing populations of intracisternal A-particle genes in myeloma tumors and mouse subspecies.
    J Virol. 1982 May;42(2):411-21 PMID: 6283165
  30. The genetic analysis of D. melanogaster heterochromatin.
    Cell. 1980 Oct;21(3):607-19 PMID: 6777044
  31. Distribution of intracisternal A-particles in a variety of normal and neoplastic mouse tissues.
    Int J Cancer. 1971 Jan 15;7(1):167-75 PMID: 4322935
  32. Reiterated genes with varying location in intercalary heterochromatin regions of Drosophila melanogaster polytene chromosomes.
    Chromosoma. 1978 Dec 21;70(1):1-17 PMID: 104847
  33. Heterogeneity of constitutive heterochromatin in somatic Syrian hamster chromosomes.
    Cytogenet Cell Genet. 1979;24(1):53-60 PMID: 88308
  34. Terminally redundant sequences in cellular intracisternal A-particle genes.
    J Virol. 1981 May;38(2):680-7 PMID: 7241664
  35. Mutant immunoglobulin genes have repetitive DNA elements inserted into their intervening sequences.
    Proc Natl Acad Sci U S A. 1982 Dec;79(23):7425-9 PMID: 6296832
  36. Drosophila genome organization: conserved and dynamic aspects.
    Annu Rev Genet. 1981;15:219-64 PMID: 6802066
  37. Activation of the c-mos oncogene in a mouse plasmacytoma by insertion of an endogenous intracisternal A-particle genome.
    Proc Natl Acad Sci U S A. 1983 Dec;80(23):7118-22 PMID: 6316344
  38. Differing levels of dispersed repetitive DNA among closely related species of Drosophila.
    Proc Natl Acad Sci U S A. 1982 Aug;79(15):4570-4 PMID: 6956880
  39. Clusters containing different mobile dispersed genes in the genome of Drosophila melanogaster.
    Nucleic Acids Res. 1980 Mar 25;8(6):1243-58 PMID: 6253933
  40. Rearrangement of the oncogene c-mos in mouse myeloma NSI and hybridomas.
    Nature. 1983 Dec 22-1984 Jan 4;306(5945):797-9 PMID: 6656883
  41. Intracisternal A-particle genes as movable elements in the mouse genome.
    Proc Natl Acad Sci U S A. 1983 Apr;80(7):1992-6 PMID: 6300886
Article Info
Journal
Chromosoma
Abbr.
Chromosoma
ISSN
0009-5915
Published
1986-00-00
Pages
213-9
Language
English
Region
Austria
NLM ID
2985138R
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]