Home LiteratureArticle Details
PMID: 319338 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Excision-repair in mutants of Escherichia coli deficient in DNA polymerase I and/or its associated 5' leads to 3' exonuclease.

Molecular & general genetics : MGG ·Vol. 150 ·No. 1 ·1977-01-07 ·Pages 1-12

Cooper P

Abstract

The ultraviolet (UV) sensitivity of Escherichia coli mutants deficient in the 5' leads to 3' exonuclease activity of DNA polymerase I is intermediate between that of pol+ strains and mutants which are deficient in the polymerizing activity of pol I (polA1). Like polA1 mutants, the 5'-exonclease deficient mutants exhibit increased UV-induced DNA degradation and increased repair synthesis compared to a pol+ strain, although the increase is not as great as in polA1 or in the conditionally lethal mutant BT4113ts deficient in both polymerase I activities. When dimer excision was measured at UV doses low enough to avoid interference from extensive DNA degradation, all three classes of polymerase I deficient mutants were found to remove dimers efficiently from their DNA. We conclude that enzymes alternative to polymerase I can operate in both the excision and resynthesis steps of excision repair and that substitution for either of the polymerase I functions results in longer patches of repair. A model is proposed detailing the possible events in the alternative pathways.

MeSH Terms
DNA Polymerase I/metabolism DNA Repair DNA, Bacterial/biosynthesis,metabolism DNA-Directed DNA Polymerase/metabolism Escherichia coli/enzymology,metabolism,radiation effects Genes Models, Biological Mutation Pyrimidine Dimers/metabolism Ultraviolet Rays
Chemicals
DNA, Bacterial Pyrimidine Dimers DNA Polymerase I DNA-Directed DNA Polymerase
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Cooper P
References (33)
33 references, click to expand
  1. Persistence of deoxyribonucleic acid polymerase I and its 5'--3' exonuclease activity in PolA mutants of Escherichia coli K12.
    J Biol Chem. 1973 Nov 25;248(22):7717-23 PMID: 4584339
  2. Role of DNA polymerase II in repair replication in Escherichia coli.
    Nat New Biol. 1973 Aug 22;244(138):242-3 PMID: 4580165
  3. Some properties of mutants of Escherichia coli K12 defective in DNA polymerase I and exonuclease V.
    Mol Gen Genet. 1974 Apr 9;130(1):29-38 PMID: 4601366
  4. Enzymatic repair of DNA.
    Annu Rev Biochem. 1975;44:19-43 PMID: 1094910
  5. Nucleoside triphosphate dependence of repair replication in toluenized Escherichia coli.
    J Mol Biol. 1974 Sep 5;88(1):13-23 PMID: 4613839
  6. Heterogeneity of patch size in repair replicated DNA in Escherichia coli.
    J Mol Biol. 1972 Jun 14;67(1):1-10 PMID: 4557600
  7. Biochemical characterization of mutant forms of DNA polymerase I from Escherichia coli. II. The polAex1 mutation.
    J Biol Chem. 1976 Jul 10;251(13):4085-9 PMID: 776979
  8. An endonuclease from Escherichia coli that acts preferentially on UV-irradiated DNA and is absent from the uvrA and uvrB mutants.
    Proc Natl Acad Sci U S A. 1974 May;71(5):1838-42 PMID: 4599989
  9. DNA repair in Escherichia coli mutants deficient in DNA polymerases I, II and-or 3.
    Proc Natl Acad Sci U S A. 1974 Mar;71(3):675-9 PMID: 4595569
  10. Excision of pyrimidine dimers in normal and T4-infected Escherichia coli: effect of polA and other mutations.
    Biochim Biophys Acta. 1975 Mar 10;383(2):188-94 PMID: 1091300
  11. Repair deficiency in a bacterial mutant defective in DNA polymerase.
    Biochem Biophys Res Commun. 1970 Apr 8;39(1):149-55 PMID: 4908846
  12. Absence of repair replication following ultraviolet irradiation of an excision-deficient mutant of Escherichia coli.
    Photochem Photobiol. 1971 Jan;13(1):83-5 PMID: 4926149
  13. Degradation of DNA following ultraviolet irradiation of Escherichia coli K12 mutants lacking DNA polymerase I and exonuclease V.
    Mol Gen Genet. 1974 Apr 9;130(1):39-45 PMID: 4601247
  14. Role of DNA polymerase I and the rec system in excision-repair in Escherichia coli.
    Proc Natl Acad Sci U S A. 1972 May;69(5):1156-60 PMID: 4556455
  15. Excision of pyrimidine dimers in toluene-treated Escherichia coli.
    J Bacteriol. 1976 Jan;125(1):220-4 PMID: 1107306
  16. The ATP dependence of the incision and resynthesis steps of excision repair.
    Biochim Biophys Acta. 1976 Aug 18;442(2):162-73 PMID: 182256
  17. Involvement of DNA polymerase 3 in excision repair after ultraviolet irradiation.
    Nat New Biol. 1973 Aug 22;244(138):240-1 PMID: 4580164
  18. In vivo studies of temperature-sensitive recB and recC mutants.
    J Bacteriol. 1974 Dec;120(3):1213-8 PMID: 4612007
  19. Deoxyribonucleic acid polymerase III of Escherichia coli. Characterization of associated exonuclease activities.
    J Biol Chem. 1975 Jan 25;250(2):470-8 PMID: 163228
  20. Repair of damage induced by ultraviolet light in DNA polymerase-defective Escherichia coli cells.
    J Mol Biol. 1971 Jun 14;58(2):623-30 PMID: 4933420
  21. Replication of Escherichia coli requires DNA polymerase I.
    Nature. 1974 Aug 9;250(5466):513-4 PMID: 4620020
  22. Conditional lethality of recA and recB derivatives of a strain of Escherichia coli K-12 with a temperature-sensitive deoxyribonucleic acid polymerase I.
    J Bacteriol. 1972 Mar;109(3):971-8 PMID: 4551758
  23. A mutant of Escherichia coli K12 deficient in the 5'-3' exonucleolytic activity of DNA polymerase I. I. General characterization.
    Mol Gen Genet. 1973 Jul 31;124(1):69-82 PMID: 4354901
  24. Exonuclease VII of Escherichia coli. Mechanism of action.
    J Biol Chem. 1974 Jul 25;249(14):4553-61 PMID: 4602030
  25. Excision of gamma-ray damaged thymine by E. coli extracts is due to the 5'leads to 3' exonuclease associated with DNA polymerase I.
    Biochem Biophys Res Commun. 1974 Dec 11;61(3):971-6 PMID: 4615713
  26. Excision of thymine dimers by proteolytic and amber fragments of E. coli DNA polymerase I.
    Biochem Biophys Res Commun. 1974 May 7;58(1):132-9 PMID: 4598440
  27. DNA polymerases II and 3 of Escherichia coli.
    Prog Nucleic Acid Res Mol Biol. 1974;14(0):101-15 PMID: 4602490
  28. A conditional lethal mutant of Escherichia coli K12 defective in the 5' leads to 3' exonuclease associated with DNA polymerase I.
    Proc Natl Acad Sci U S A. 1974 May;71(5):2048-51 PMID: 4600786
  29. Isolation of an E. coli strain with a mutation affecting DNA polymerase.
    Nature. 1969 Dec 20;224(5225):1164-6 PMID: 4902142
  30. A mutant of Escherichia coli K12 deficient in the 5'-3' exonucleolytic activity of DNA polymerase I. II. Purification and properties of the mutant enzyme.
    Mol Gen Genet. 1973 Jul 31;124(1):83-96 PMID: 4582300
  31. Measurement of thymine dimers in DNA by thin-layer chromatography. II. The use of one-dimensional systems.
    Anal Biochem. 1976 Jun;73(2):411-8 PMID: 962051
  32. Role of ATP in excision repair of ultraviolet radiation damage in Escherichia coli.
    Proc Natl Acad Sci U S A. 1974 Jul;71(7):2651-4 PMID: 4605075
  33. Excision-repair properties of an Escherichia coli mutant deficient in DNA polymerase.
    Nature. 1970 May 23;226(5247):708-10 PMID: 4910149
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1977-01-07
Pages
1-12
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]