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PMID: 33039809 Published · ppublish English Journal Article

Generating wall shear stress for coronary artery in real-time using neural networks: Feasibility and initial results based on idealized models.

Computers in biology and medicine ·Vol. 126 ·2020-00-00 ·页码 104038

Su B, Zhang JM, Zou H, Ghista D, Le TT, Chin C

Abstract

Computational fluid dynamics (CFD) and medical imaging can be integrated to derive some important hemodynamic parameters such as wall shear stress (WSS). However, CFD suffers from a relatively long computational time that usually varies from dozens of minutes to hours. Machine learning is a popular tool that has been applied to many fields, and it can predict outcomes fast and even instantaneously in most applications. This study aims to use machine learning as an alternative to CFD for generating hemodynamic parameters in real-time diagnosis during medical examinations. To perform the feasibility study, we used CFD to model the blood flow in 2000 idealized coronary arteries, and the calculated WSS values in these models were used as the dataset for training and testing. The preparation of the dataset was automated by scripts programmed in Python, and OpenFOAM was used as the CFD solver. We have explored multivariate linear regression, multi-layer perceptron, and convolutional neural network architectures to generate WSS values from coronary artery geometry directly without CFD. These architectures were implemented in TensorFlow 2.0. Our results showed that these algorithms were able to generate results in less than 1 s, proving its capability in real-time applications, in terms of computational time. Based on the accuracy, convolutional neural network outperformed the other architectures with a normalized mean absolute error of 2.5%. Although this study is based on idealized models, to the best of our knowledge, it is the first attempt to predict WSS in a stenosed coronary artery using machine learning approaches.

Keywords
Computational fluid dynamics Coronary artery Neural network Real-time prediction Wall shear stress
MeSH 主题词
Computer Simulation Coronary Vessels/diagnostic imaging Feasibility Studies Hemodynamics Hydrodynamics Models, Cardiovascular Neural Networks, Computer Shear Strength Stress, Mechanical
作者与单位
共 6 位作者,点击展开单位 / ORCID
Su Boyang
National Heart Research Institute Singapore, National Heart Centre Singapore, Singapore. Electronic address: [email protected].
Zhang Jun-Mei
National Heart Research Institute Singapore, National Heart Centre Singapore, Singapore; Cardiovascular Sciences ACP, Duke NUS Medical School, Singapore.
Zou Hua
Department of Statistics, Texas A&M University, TX, USA.
Ghista Dhanjoo
University 2020 Foundation, San Jose, CA, USA.
Le Thu Thao
National Heart Research Institute Singapore, National Heart Centre Singapore, Singapore; Cardiovascular Sciences ACP, Duke NUS Medical School, Singapore.
Chin Calvin
National Heart Research Institute Singapore, National Heart Centre Singapore, Singapore; Cardiovascular Sciences ACP, Duke NUS Medical School, Singapore.
Article Info
Journal
Computers in biology and medicine
Abbr.
Comput Biol Med
ISSN
1879-0534
Corresponding email
Published
2020-00-00
电子出版
2020-00-07
页码
104038
Language
English
Country/Region
United States
NLM ID
1250250
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