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PMID: 34594356 Published · epublish English Journal Article

Pan-Cancer Analysis of PIMREG as a Biomarker for the Prognostic and Immunological Role.

Frontiers in genetics ·Vol. 12 ·2021-00-00 ·页码 687778

Zhu H, Hu X, Ye Y, Jian Z, Zhong Y, Gu L, Xiong X

Abstract

Phosphatidylinositol binding clathrin assembly protein interacting mitotic regulator (PIMREG) localizes to the nucleus and can significantly elevate the nuclear localization of clathrin assembly lymphomedullary leukocythemia gene. Although there is some evidence to support an important action for PIMREG in the occurrence and development of certain cancers, currently no pan-cancer analysis of PIMREG is available. Therefore, we intended to estimate the prognostic predictive value of PIMREG and to explore its potential immune function in 33 cancer types. By using a series of bioinformatics approaches, we extracted and analyzed datasets from Oncomine, The Cancer Genome Atlas, Cancer Cell Lineage Encyclopedia (CCLE) and the Human Protein Atlas (HPA), to explore the underlying carcinogenesis of PIMREG, including relevance of PIMREG to prognosis, microsatellite instability (MSI), tumor mutation burden (TMB), tumor microenvironment (TME) and infiltration of immune cells in various types of cancer. Our findings indicate that PIMREG is highly expressed in at least 24 types of cancer, and is negatively correlated with prognosis in major cancer types. In addition, PIMREG expression was correlated with TMB in 24 cancers and with MSI in 10 cancers. We revealed that PIMREG is co-expressed with genes encoding major histocompatibility complex, immune activation, immune suppression, chemokine and chemokine receptors. We also found that the different roles of PIMREG in the infiltration of different immune cell types in different tumors. PIMREG can potentially influence the etiology or pathogenesis of cancer by acting on immune-related pathways, chemokine signaling pathway, regulation of autophagy, RIG-I like receptor signaling pathway, antigen processing and presentation, FC epsilon RI pathway, complement and coagulation cascades, T cell receptor pathway, NK cell mediated cytotoxicity and other immune-related pathways. Our study suggests that PIMREG can be applied as a prognostic marker in a variety of malignancies because of its role in tumorigenesis and immune infiltration.

Keywords
MSI PIMREG TMB pan-cancer prognosis tumor immunity
作者与单位
共 7 位作者,点击展开单位 / ORCID
Zhu Hua
Department of Neurosurgery, Renmin Hospital of Wuhan University, Wuhan, China. | Central Laboratory, Renmin Hospital of Wuhan University, Wuhan, China.
Hu Xinyao
Central Laboratory, Renmin Hospital of Wuhan University, Wuhan, China. | Department of Oncology, Renmin Hospital of Wuhan University, Wuhan, China.
Ye Yingze
Department of Neurosurgery, Renmin Hospital of Wuhan University, Wuhan, China.
Jian Zhihong
Department of Neurosurgery, Renmin Hospital of Wuhan University, Wuhan, China.
Zhong Yi
Department of Neurosurgery, Renmin Hospital of Wuhan University, Wuhan, China. | Central Laboratory, Renmin Hospital of Wuhan University, Wuhan, China.
Gu Lijuan
Central Laboratory, Renmin Hospital of Wuhan University, Wuhan, China. | Department of Anesthesiology, Renmin Hospital of Wuhan University, Wuhan, China.
Xiong Xiaoxing
Department of Neurosurgery, Renmin Hospital of Wuhan University, Wuhan, China. | Central Laboratory, Renmin Hospital of Wuhan University, Wuhan, China.
Article Info
Journal
Frontiers in genetics
Abbr.
Front Genet
ISSN
1664-8021
Published
2021-00-00
电子出版
2021-00-14
页码
687778
Language
English
Country/Region
Switzerland
NLM ID
101560621
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