Home LiteratureArticle Details
PMID: 3472201 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Synchrotron x-ray diffraction studies of actin structure during polymerization.

Matsudaira P, Bordas J, Koch MH

Abstract

Synchrotron x-ray diffraction was used to identify the oligomers that formed during the earliest stages of actin polymerization. Solution diffraction patterns from G-actin (monomer) and from F-actin (polymer) contain information about the size and shape of actin monomers and the length, width, and subunit organization of filaments. Comparison of patterns collected during polymerization reveals an increase in scatter at spacings greater than 9.0 nm; formation of scattering bands at 5.4,4.9, and 3.4 nm; formation of a scattering minimum at 6.5 nm; and the presence of an isosbestic point at 9.0 nm. These scattering bands arise from the formation of, and organization of subunits in, filaments. At various actin concentrations (0.37-5 mg/ml), the change in scatter in these regions follows simple exponential kinetics with no detectable lag. Our analysis of the x-ray patterns shows that by 0.4 sec after mixing, most of the actin has formed dimers, which then rapidly incorporate into oligomers. At 4 mg/ml the early oligomers increase in length to greater than 30.0 nm within 10 sec. These results suggest that under our conditions actin molecules condense into filaments without the rate-limiting formation of nuclei.

MeSH Terms
Actins/metabolism Animals Kinetics Macromolecular Substances Muscles/metabolism Particle Accelerators Protein Conformation Rabbits X-Ray Diffraction/methods
Chemicals
Actins Macromolecular Substances
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Matsudaira P
Bordas J
Koch M H
References (36)
36 references, click to expand
  1. Head to tail polymerization of actin.
    J Mol Biol. 1976 Nov;108(1):139-50 PMID: 1003481
  2. Pyrene actin: documentation of the validity of a sensitive assay for actin polymerization.
    J Muscle Res Cell Motil. 1983 Apr;4(2):253-62 PMID: 6863518
  3. Nonlinear increase of elongation rate of actin filaments with actin monomer concentration.
    Biochemistry. 1986 Aug 26;25(17):4899-906 PMID: 2945593
  4. The structure of F-actin.
    J Muscle Res Cell Motil. 1985 Apr;6(2):129-51 PMID: 3897278
  5. Stages of tubulin assembly and disassembly studied by time-resolved synchrotron X-ray scattering.
    J Mol Biol. 1983 Feb 15;164(1):89-135 PMID: 6842593
  6. Mechanism of K+-induced actin assembly.
    J Cell Biol. 1982 Jun;93(3):648-54 PMID: 6889598
  7. Spontaneous fragmentation of actin filaments in physiological conditions.
    Nature. 1982 Mar 18;296(5854):266-7 PMID: 7199623
  8. Detection of actin assembly by fluorescence energy transfer.
    J Cell Biol. 1981 May;89(2):362-7 PMID: 6894758
  9. Synchrotron radiation x-ray scattering in the early stages of in vitro collagen fibril formation.
    Proc Natl Acad Sci U S A. 1985 Jul;82(14):4693-6 PMID: 3860817
  10. Three-dimensional structure of the complex of actin and DNase I at 4.5 A resolution.
    EMBO J. 1985 Aug;4(8):2113-8 PMID: 4065103
  11. Actin: volume change on transformation of G-form to F-form.
    Science. 1966 Jun 24;152(3730):1756-7 PMID: 5938415
  12. Polymerization of ADP-actin and ATP-actin under sonication and characteristics of the ATP-actin equilibrium polymer.
    J Biol Chem. 1985 Jun 10;260(11):6565-71 PMID: 3997836
  13. Time-resolved X-ray scattering study of actin polymerization from profilactin.
    Eur Biophys J. 1985;13(2):99-108 PMID: 4085417
  14. The flexibility of F-actin.
    Biophys Chem. 1980 Jun;11(3-4):443-6 PMID: 6996755
  15. Structure of tubulin rings studied by X-ray scattering using synchrotron radiation.
    J Mol Biol. 1983 Jun 15;167(1):179-96 PMID: 6864800
  16. X-ray kinetic studies of microtubule assembly using synchrotron radiation.
    Nature. 1980 Oct 16;287(5783):595-9 PMID: 7432480
  17. The cooperative nature of G-F transformation of actin.
    Biochim Biophys Acta. 1962 Feb 12;57:22-31 PMID: 14454110
  18. Effect of capping protein on the kinetics of actin polymerization.
    Biochemistry. 1985 Jan 29;24(3):793-9 PMID: 3994986
  19. 12-fold difference between the critical monomer concentrations of the two ends of actin filaments in physiological salt conditions.
    Proc Natl Acad Sci U S A. 1983 Aug;80(16):4922-5 PMID: 6576365
  20. Detection of conformational changes in actin by proteolytic digestion: evidence for a new monomeric species.
    J Mol Biol. 1976 Jul 15;104(4):777-92 PMID: 957440
  21. Assembly of actin filaments studied by laser light scattering and fluorescence photobleaching recovery.
    Biophys J. 1986 Jan;49(1):147-9 PMID: 19431624
  22. Fragmentation of actin filaments.
    Biochemistry. 1982 Apr 13;21(8):1909-13 PMID: 6805509
  23. Role of fimbrin and villin in determining the interfilament distances of actin bundles.
    Nature. 1983 Jan 20;301(5897):209-14 PMID: 6823301
  24. Thermodynamical aspect of G-F transformations of actin.
    Biochim Biophys Acta. 1969 Jun 24;180(2):399-409 PMID: 5795476
  25. [Conditions and results of medico-social rehabilitation at the rehabilitation centre of Cologne University (author's transl)].
    Rehabilitation (Stuttg). 1981 Feb;20(1):13-6 PMID: 7221173
  26. The interaction between ATP-actin and ADP-actin. A tentative model for actin polymerization.
    J Biol Chem. 1985 Jun 10;260(11):6572-8 PMID: 3997837
  27. Fluorimetry study of N-(1-pyrenyl)iodoacetamide-labelled F-actin. Local structural change of actin protomer both on polymerization and on binding of heavy meromyosin.
    Eur J Biochem. 1981;114(1):33-8 PMID: 7011802
  28. The low-angle x-ray diagram of vertebrate striated muscle and its behaviour during contraction and rigor.
    J Mol Biol. 1967 Dec 14;30(2):383-434 PMID: 5586931
  29. Kinetics of the cooperative association of actin to actin filaments.
    Biophys Chem. 1975 Jul;3(3):215-25 PMID: 1174645
  30. Kinetic evidence for a monomer activation step in actin polymerization.
    Biochemistry. 1983 Apr 26;22(9):2193-202 PMID: 6860660
  31. The superstructure of chromatin and its condensation mechanism. II. Theoretical analysis of the X-ray scattering patterns and model calculations.
    Eur Biophys J. 1986;13(3):175-85 PMID: 3956446
  32. Polymerization of actin: mechanism of the Mg2+-induced process at pH 8 and 20 degrees C.
    Proc Natl Acad Sci U S A. 1983 Nov;80(21):6513-7 PMID: 6579538
  33. Polymerization of actin and actin-like systems: evaluation of the time course of polymerization in relation to the mechanism.
    Biochemistry. 1983 Dec 6;22(25):5836-43 PMID: 6661414
  34. A theory of linear and helical aggregations of macromolecules.
    J Mol Biol. 1962 Jan;4:10-21 PMID: 14482095
  35. The magnesium-ion-dependent adenosine triphosphatase of bovine cardiac Myosin and its subfragment-1.
    Biochem J. 1976 Nov;159(2):301-15 PMID: 136961
  36. Cytochalasin D and platelet gelsolin accelerate actin polymer formation. A model for regulation of the extent of actin polymer formation in vivo.
    Biochemistry. 1982 Jun 22;21(13):3207-14 PMID: 6285961
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1987-05-00
Pages
3151-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC304826
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]