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PMID: 3578274 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

An algorithm for automatic genotype elimination.

American journal of human genetics ·Vol. 40 ·No. 3 ·1987-03-00 ·Pages 250-6

Lange K, Goradia TM

Abstract

Automatic genotype elimination algorithms for a single locus play a central role in making likelihood computations on human pedigree data feasible. We present a simple algorithm that is fully efficient in pedigrees without loops. This algorithm can be easily coded and has been instrumental in greatly reducing computing times for pedigree analysis. A contrived counter-example demonstrates that some superfluous genotypes cannot be excluded for inbred pedigrees.

MeSH Terms
Algorithms Genotype Humans Pedigree Phenotype Probability
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Lange K
Goradia T M
References (4)
4 references, click to expand
  1. A general model for the genetic analysis of pedigree data.
    Hum Hered. 1971;21(6):523-42 PMID: 5149961
  2. Linkage analysis in man.
    Adv Hum Genet. 1980;10:209-66 PMID: 6994459
  3. Segregation analysis.
    Adv Hum Genet. 1981;11:63-120, 372-3 PMID: 7023205
  4. Extensions to pedigree analysis. V. Optimal calculation of Mendelian likelihoods.
    Hum Hered. 1983;33(5):291-301 PMID: 6654362
Article Info
Journal
American journal of human genetics
Abbr.
Am J Hum Genet
ISSN
0002-9297
Published
1987-03-00
Pages
250-6
Language
English
Region
United States
NLM ID
0370475
PMCID
PMC1684108
Subset
IM
Grants
NIADDK NIH HHS · AM33329 · United States
NHLBI NIH HHS · HL07505 · United States
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