Home LiteratureArticle Details
PMID: 3840018 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Primary structure of the telopeptide and a portion of the helical domain of chicken type II procollagen as determined by DNA sequence analysis.

The Biochemical journal ·Vol. 229 ·No. 1 ·1985-07-01 ·Pages 189-96

Deák F, Argraves WS, Kiss I, Sparks KJ, Goetinck PF

Abstract

A comparison of the nucleotide sequences of three new cDNA clones for chicken type II procollagen with the sequences of the other three types of chicken fibrillar procollagens reveals that the most conserved regions correlate with the positions of hydroxyproline, hydroxylysine, cysteine and lysine residues. On the basis of replacement-site-divergence calculations it is concluded that alpha 1(II) and alpha 1(I) procollagens diverged later than alpha 1(I) and alpha 2(I) procollagens.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Cartilage/analysis Chickens Cloning, Molecular DNA Nucleic Acid Hybridization Peptides Procollagen
Chemicals
Peptides Procollagen DNA
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Deák F
Argraves W S
Kiss I
Sparks K J
Goetinck P F
References (26)
26 references, click to expand
  1. Structure and sequence of the chicken type II procollagen gene. Characterization of the region encoding the carboxyl-terminal telopeptide and propeptide.
    J Biol Chem. 1984 Jun 25;259(12):7826-34 PMID: 6330084
  2. Construction of a colicin E1-R factor composite plasmid in vitro: means for amplification of deoxyribonucleic acid.
    J Bacteriol. 1975 Jan;121(1):354-62 PMID: 1090574
  3. Covalent structure of cartilage collagen. Amino acid sequence of residues 363-551 of bovine alpha1(II) chains.
    Biochemistry. 1977 Nov 15;16(23):4981-90 PMID: 911809
  4. Biosynthesis of procollagen.
    Annu Rev Biochem. 1978;47:129-62 PMID: 354493
  5. Isolation and characterization of a 15-kilobase genomic sequence coding for part of the Pro alpha 2 chain of sheep type I collagen.
    J Biol Chem. 1980 Apr 10;255(7):3212-20 PMID: 6244313
  6. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  7. The evolution of genes: the chicken preproinsulin gene.
    Cell. 1980 Jun;20(2):555-66 PMID: 7388949
  8. Structurally distinct collagen types.
    Annu Rev Biochem. 1980;49:957-1003 PMID: 6157354
  9. Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.
    Proc Natl Acad Sci U S A. 1980 Sep;77(9):5201-5 PMID: 6159641
  10. Sequence determination and analysis of the 3' region of chicken pro-alpha 1(I) and pro-alpha 2(I) collagen messenger ribonucleic acids including the carboxy-terminal propeptide sequences.
    Biochemistry. 1981 Feb 17;20(4):996-1006 PMID: 6927845
  11. Construction and partial characterization of two recombinant cDNA clones for procollagen from chicken cartilage.
    Nucleic Acids Res. 1982 Feb 25;10(4):1175-92 PMID: 6280134
  12. Identification of clones that encode chicken tropomyosin by direct immunological screening of a cDNA expression library.
    Proc Natl Acad Sci U S A. 1983 Jan;80(1):31-5 PMID: 6185958
  13. DNA sequence analysis of a mouse pro alpha 1 (I) procollagen gene: evidence for a mouse B1 element within the gene.
    Mol Cell Biol. 1982 Nov;2(11):1362-71 PMID: 6298597
  14. Structure of a cDNA for the pro alpha 2 chain of human type I procollagen. Comparison with chick cDNA for pro alpha 2(I) identifies structurally conserved features of the protein and the gene.
    Biochemistry. 1983 Mar 1;22(5):1139-45 PMID: 6687691
  15. A conserved nucleotide sequence, coding for a segment of the C-propeptide, is found at the same location in different collagen genes.
    Nucleic Acids Res. 1983 May 11;11(9):2733-44 PMID: 6856474
  16. Atmospheric and hydrospheric evolution on the primitive earth. Both secular accretion and biological and geochemical processes have affected earth's volatile envelope.
    Science. 1968 May 17;160(3829):729-36 PMID: 5646415
  17. Effect of growth conditions on the formation of the relaxation complex of supercoiled ColE1 deoxyribonucleic acid and protein in Escherichia coli.
    J Bacteriol. 1972 Jun;110(3):1135-46 PMID: 4555406
  18. Studies on transformation of Escherichia coli with plasmids.
    J Mol Biol. 1983 Jun 5;166(4):557-80 PMID: 6345791
  19. Buffer gradient gels and 35S label as an aid to rapid DNA sequence determination.
    Proc Natl Acad Sci U S A. 1983 Jul;80(13):3963-5 PMID: 6575390
  20. Construction and characterization of type II collagen complementary deoxyribonucleic acid clones.
    Nucleic Acids Res. 1983 Sep 10;11(17):6021-39 PMID: 6310524
  21. Identification of genomic DNA coding for chicken type II procollagen.
    J Biol Chem. 1983 Oct 10;258(19):11617-21 PMID: 6311817
  22. Guide to the use of type II restriction endonucleases.
    Methods Enzymol. 1983;100:3-38 PMID: 6312262
  23. Plasmid screening at high colony density.
    Methods Enzymol. 1983;100:333-42 PMID: 6194407
  24. Nucleotide sequences of complementary deoxyribonucleic acids for the pro alpha 1 chain of human type I procollagen. Statistical evaluation of structures that are conserved during evolution.
    Biochemistry. 1983 Oct 25;22(22):5213-23 PMID: 6689127
  25. Isolation and characterization of genomic clones corresponding to the human type II procollagen gene.
    Nucleic Acids Res. 1984 Jan 25;12(2):1025-38 PMID: 6320112
  26. Polynucleotide kinase exchange reaction: quantitave assay for restriction endonuclease-generated 5'-phosphoroyl termini in DNA.
    J Biol Chem. 1977 May 25;252(10):3176-84 PMID: 16886
Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
1985-07-01
Pages
189-96
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1145166
Subset
IM
Grants
NICHD NIH HHS · HD09174 · United States
Databases
GENBANK
X02663
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]