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PMID: 38890346 Published · epublish English Journal Article

Identification of a novel monocyte/macrophage-related gene signature for predicting survival and immune response in acute myeloid leukemia.

Scientific reports ·Vol. 14 ·No. 1 ·2024-00-18 ·页码 14012

Zhan Y, Ma S, Zhang T, Zhang L, Zhao P, Yang X, Liu M, Cheng W, Li Y, Wang J

Abstract

Acute myeloid leukemia (AML) is a heterogeneous hematological tumor with poor immunotherapy effect. This study was to develop a monocyte/macrophage-related prognostic risk score (MMrisk) and identify new therapeutic biomarkers for AML. We utilized differentially expressed genes (DEGs) in combination with single-cell RNA sequencing to identify monocyte/macrophage-related genes (MMGs). Eight genes were selected for the construction of a MMrisk model using univariate Cox regression analysis and LASSO regression analysis. We then validated the MMrisk on two GEO datasets. Lastly, we investigated the immunologic characteristics and advantages of immunotherapy and potential targeted drugs for MMrisk groups. Our study identified that the MMrisk is composed of eight MMGs, including HOPX, CSTB, MAP3K1, LGALS1, CFD, MXD1, CASP1 and BCL2A1. The low MMrisk group survived longer than high MMrisk group (P < 0.001). The high MMrisk group was positively correlated with B cells, plasma cells, CD4 memory cells, Mast cells, CAFs, monocytes, M2 macrophages, Endothelial, tumor mutation, and most immune checkpoints (PD1, Tim-3, CTLA4, LAG3). Furthermore, drug sensitivity analysis showed that AZD.2281, Axitinib, AUY922, ABT.888, and ATRA were effective in high-risk MM patients. Our research shows that MMrisk is a potential biomarker which is helpful to identify the molecular characteristics of AML immunology.

Keywords
AML Immune response Monocyte/macrophage Tumor immune microenvironment
MeSH 主题词
Humans Leukemia, Myeloid, Acute/genetics,immunology,mortality Monocytes/immunology,metabolism Prognosis Macrophages/immunology,metabolism Female Biomarkers, Tumor/genetics Male Middle Aged Immunotherapy/methods Transcriptome Gene Expression Profiling Gene Expression Regulation, Leukemic
化学物质
Biomarkers, Tumor
作者与单位
共 10 位作者,点击展开单位 / ORCID
Zhan Yun
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Department of Clinical Medical School, Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Ma Sixing
Department of Clinical Medical School, Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Department of Vascular Surgery, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Zhang Tianzhuo
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Zhang Luxin
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Zhao Peng
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Yang Xueying
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Liu Min
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Cheng Weiwei
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Li Ya
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China.
Wang Jishi
Department of Hematology, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. [email protected]. | Department of Clinical Medical School, Guizhou Medical University, Guiyang, 550004, People's Republic of China. [email protected]. | Guizhou Province Institute of Hematology, Guizhou Province Hematopoietic Stem Cell Transplantation Center, Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, People's Republic of China. [email protected].
Article Info
Journal
Scientific reports
Abbr.
Sci Rep
ISSN
2045-2322
Corresponding email
Published
2024-00-18
电子出版
2024-00-18
页码
14012
Language
English
Country/Region
England
NLM ID
101563288
基金资助
National Natural Science Foundation of China · No.82370168
National Natural Science Foundation of China · No.82170168
National Natural Science Foundation of China · No.82260728
National Natural Science Foundation of China · No.82260045
National Natural Science Foundation of China · No.82160704
National Natural Science Foundation of China · No.82160046
General Program Cultivation Project of National Natural Science Foundation of China (NSFC), Affiliated Hospital of Guizhou Medical University · Gyfynsfc-2021-3
Cultivation Project of National Natural Science Foundation of Guizhou Medical University · 20NSP027
Translational Research Grant of NCRCH · 2021WWB01
Science and Technology Program of Guizhou Province Health Committee · gzwkj2024-365
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