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PMID: 3917035 Published · ppublish English Journal Article

On the toroidal condensed state of closed circular DNA.

Journal of biomolecular structure & dynamics ·Vol. 3 ·No. 3 ·1985-12-00 ·Pages 515-20

Grosberg AYu, Zhestkov AV

Abstract

The influence of double helix torsional elasticity on the compaction and structure of circular DNA compact form is studied theoretically in the case when the compact (globular) form has torus shape. For closed circular DNA the topological invariant, the linking number, yields a strict connection between conformation of the double helix considered as unifilar homopolymer and elastic energy of torsional twisting. The contribution of torsional elasticity to the free energy of the toruslike globule is calculated. This contribution is shown to be proportional to the square of superhelical density. Allowance of the torsional elasticity decreases the equilibrium radius of the toruslike globule formed by circular DNA. Closure of linear DNA into a ring widens the stability range of the relatively short DNA compact form and tightens it for long DNA.

MeSH Terms
DNA, Circular DNA, Superhelical Elasticity Models, Chemical Models, Theoretical Nucleic Acid Conformation Thermodynamics
Chemicals
DNA, Circular DNA, Superhelical
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Grosberg AYu
Institute of Chemical Physics, USSR Academy of Sciences, Moscow.
Zhestkov A V
Article Info
Journal
Journal of biomolecular structure & dynamics
Abbr.
J Biomol Struct Dyn
ISSN
0739-1102
Published
1985-12-00
Pages
515-20
Language
English
Region
England
NLM ID
8404176
Subset
IM
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