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PMID: 40931015 已发表 · epublish 英语

Chromosome-level assembly of the 400-year-old Goethe's Palm (Chamaerops humilis L.).

Scientific data ·第 12 卷 ·第 1 期 ·2025-09-10

Beltran-Sanz N, Prost S, Malavasi V, Moschin S, Greve C, Schell T, Morosinotto T, Dal Grande F

摘要

The rapid decline in global biodiversity highlights the urgent need for conservation efforts, with botanical gardens playing a crucial role in ex situ plant preservation. Monumental plants, such as the 400-year-old Goethe's Palm (Chamaerops humilis L.) at the Padua Botanical Garden serve as vital flagship species with significant ecological and cultural value. In this study, we present the first chromosome-level genome assembly of C. humilis, using PacBio HiFi and Arima Hi-C sequencing technologies. The assembled genome spans 4.41 Gbp with a scaffold N50 length of 195 Mbp and it includes 18 pseudo-chromosomes. Repetitive elements constituted approximately 88% of the genome, with Long Terminal Repeats (LTR) alone comprising 63%. A total of 28,321 protein-coding genes were predicted and annotated. The Goethe's Palm genome assembly is a valuable resource for exploring both its cultural and historical significance, as well as the genetic basis of adaptive traits that allow this palm to thrive in Mediterranean environments.

文献信息
期刊
Scientific data
期刊简称
Sci Data
ISSN
2052-4463
发表日期
2025-09-10
语言
英语
国家/地区
England
NLM ID
101640192
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