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PMID: 4355929 Published · ppublish English Journal Article

Hydroxyapatite chromatography and formamide denaturation of adenovirus DNA.

Journal of virology ·Vol. 12 ·No. 2 ·1973-08-00 ·Pages 218-25

Tibbetts C, Johansson K, Philipson L

Abstract

Denatured adenovirus DNA was retained by hydroxyapatite columns under conditions generally used for selective retention of double-stranded DNA, probably due to several partially complementary sequences within single-stranded DNA. It was found that addition of formamide reduced the fraction of sonically treated, denatured adenovirus DNA bound to hydroxyapatite from about 30% to less than 1%. This led to a study of the effect of formamide on the melting temperature (T(m)) of double-stranded DNA in solution or bound to hydroxyapatite. The T(m) of DNA decreases 0.56 C/1% formamide, a value determined in buffered solutions with purified formamide.

MeSH Terms
Adenoviridae/analysis Carbon Radioisotopes Centrifugation, Density Gradient Chromatography/standards DNA, Single-Stranded/analysis,isolation & purification DNA, Viral/analysis,isolation & purification Formamides Hot Temperature Hydrogen-Ion Concentration Hydroxyapatites Methods Molecular Weight Nucleic Acid Denaturation Nucleic Acid Renaturation Simian virus 40/analysis Spectrophotometry Tritium Vibration
Chemicals
Carbon Radioisotopes DNA, Single-Stranded DNA, Viral Formamides Hydroxyapatites Tritium
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Tibbetts C
Johansson K
Philipson L
References (21)
21 references, click to expand
  1. Nucleotide sequence repetition: a rapidly reassociating fraction of mouse DNA.
    Science. 1966 Nov 11;154(3750):791-4 PMID: 5919450
  2. Selective extraction of polyoma DNA from infected mouse cell cultures.
    J Mol Biol. 1967 Jun 14;26(2):365-9 PMID: 4291934
  3. Adenovirus DNA. I. Molecular weight and conformation.
    Proc Natl Acad Sci U S A. 1967 May;57(5):1302-9 PMID: 5231735
  4. A dye-buoyant-density method for the detection and isolation of closed circular duplex DNA: the closed circular DNA in HeLa cells.
    Proc Natl Acad Sci U S A. 1967 May;57(5):1514-21 PMID: 5231757
  5. Kinetics of renaturation of DNA.
    J Mol Biol. 1968 Feb 14;31(3):349-70 PMID: 5637197
  6. Characterization of a naturally occurring, cross-linked fraction of DNA. 1. Nature of the cross-linkage.
    J Mol Biol. 1968 Mar 14;32(2):379-403 PMID: 4966870
  7. Characterization of a naturally occurring, cross-linked fraction of DNA. II. Origin of the cross-linkage.
    J Mol Biol. 1968 Mar 14;32(2):405-21 PMID: 4966871
  8. Residual transforming activity of denatured Haemophilus influenzae DNA.
    J Mol Biol. 1968 Mar 14;32(2):437-51 PMID: 5300446
  9. Repeated sequences in DNA. Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms.
    Science. 1968 Aug 9;161(3841):529-40 PMID: 4874239
  10. The polypeptides of adenovirus. I. Evidence for multiple protein components in the virion and a comparison of types 2, 7A, and 12.
    Virology. 1968 Sep;36(1):115-25 PMID: 5669982
  11. Nucleic acid reassociation in formamide.
    Biochemistry. 1969 Aug;8(8):3289-95 PMID: 4980190
  12. The replication of the ring-shaped DNA of polyoma virus. I. Identification of the replicative intermediate.
    Proc Natl Acad Sci U S A. 1969 Oct;64(2):701-8 PMID: 4311378
  13. Homology and structural relationships between the dimeric and monomeric circular forms of mitochondrial DNA from human leukemic leukocytes.
    J Mol Biol. 1970 Jan 28;47(2):137-53 PMID: 5265062
  14. The nucleotide sequence of a low molecular weight ribonucleic acid from cells infected with adenovirus 2.
    J Biol Chem. 1971 Nov 25;246(22):6991-7009 PMID: 4331202
  15. Virus-coded origin of a low molecular weight RNA from KB cells infected with adenovirus 2.
    Virology. 1972 Mar;47(3):726-33 PMID: 5012648
  16. A unique form of terminal redundancy in adenovirus DNA molecules.
    Proc Natl Acad Sci U S A. 1972 Sep;69(9):2391-5 PMID: 4560685
  17. Adenovirus-2 DNA contains an inverted terminal repetition.
    Proc Natl Acad Sci U S A. 1972 Oct;69(10):3054-7 PMID: 4507622
  18. Reassociation of nucleic acids in solutions containing formamide.
    Biochem Biophys Res Commun. 1973 Jan 4;50(1):91-7 PMID: 4567088
  19. Amount of viral DNA in the genome of cells transformed by adenovirus type 2.
    J Mol Biol. 1973 Jan;73(1):125-30 PMID: 4734785
  20. NUCLEOTIDE COMPOSITION OF SHORT SEGMENTS OF DNA MOLECULES.
    J Mol Biol. 1965 Feb;11:223-37 PMID: 14290342
  21. SEDIMENTATION STUDIES OF THE SIZE AND SHAPE OF DNA.
    J Mol Biol. 1965 Feb;11:373-90 PMID: 14290352
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1973-08-00
Pages
218-25
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC356615
Subset
IM
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