Abstract
The specificity with which the genetic code is read in protein synthesis, and with which other highly specific biosynthetic reactions take place, can be increased above the level available from free energy differences in intermediates or kinetic barriers by a process defined here as kinetic proofreading. A simple kinetic pathway is described which results in this proofreading when the reaction is strongly but nonspecifically driven, e.g., by phosphate hydrolysis. Protein synthesis, amino acid recognition, and DNA replication, all exhibit the features of this model. In each case, known reactions which otherwise appear to be useless or deleterious complications are seen to be essential to the proofreading function.
MeSH Terms
Amino Acid Sequence
Amino Acids/metabolism
DNA Replication
Genetic Code
Kinetics
Models, Biological
Protein Biosynthesis
RNA, Transfer/metabolism
Chemicals
Amino Acids
RNA, Transfer
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Hopfield J J
References (13)
13 references, click to expand
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