Home LiteratureArticle Details
PMID: 6118138 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Analysis of structural similarities between brain Thy-1 antigen and immunoglobulin domains. Evidence for an evolutionary relationship and a hypothesis for its functional significance.

The Biochemical journal ·Vol. 195 ·No. 1 ·1981-04-01 ·Pages 31-40

Cohen FE, Novotný J, Sternberg MJ, Campbell DG, Williams AF

Abstract

The Thy-1 membrane glycoprotein from rat brain is shown to have structural and sequence homologies with immunoglobulin (Ig) domains on the basis of the following evidence. 1. The two disulphide bonds of Thy-1 are both consistent with the Ig-fold. 2. The molecule contains extensive beta-structure as shown by the c.d. spectrum. 3. Secondary structure prediction locates beta-strands along the sequence in a manner consistent with the Ig-fold. 4. On the basis of rules derived from known beta-sheet structures, a three-dimensional structure with the Ig-fold is predicted as favourable for Thy-1. 5. Sequences in the proposed beta-strands of Thy-1 and known beta-strands of Ig domains show significant sequence homology. This homology is statistically more significant than for the comparison of proposed beta-strand sequences of beta 2-microglobulin with Ig domains. An hypothesis is presented for the possible functional significance of an evolutionary relationship between Thy-1 and Ig. It is suggested that both Thy-1 and Ig evolved from primitive molecules, with an Ig fold, which mediated cell--cell interactions. The present-day role of Thy-1 may be similar to that of the primitive domain.

MeSH Terms
Amino Acid Sequence Animals Antigens, Surface Brain Chemistry Chemical Phenomena Chemistry Disulfides Glycoproteins Immunoglobulins Macromolecular Substances Membrane Proteins Models, Chemical Protein Conformation Rats Thy-1 Antigens
Chemicals
Antigens, Surface Disulfides Glycoproteins Immunoglobulins Macromolecular Substances Membrane Proteins Thy-1 Antigens
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Cohen F E
Novotný J
Sternberg M J
Campbell D G
Williams A F
References (34)
34 references, click to expand
  1. The relation between frequencies of amino acids and ordered trinucleotides.
    J Mol Biol. 1966 Mar;16(1):1-8 PMID: 5296819
  2. Rat brain Thy-1 glycoprotein. The amino acid sequence, disulphide bonds and an unusual hydrophobic region.
    Biochem J. 1981 Apr 1;195(1):15-30 PMID: 6118137
  3. The disulphide bonds of the heavy chain of rabbit immunoglobulin G.
    Biochem J. 1970 Jan;116(2):261-8 PMID: 5461107
  4. Amino-acid sequence of porcine pancreatic elastase and its homologies with other serine proteinases.
    Nature. 1970 Feb 28;225(5235):802-6 PMID: 5415108
  5. The covalent structure of a human gamma G-immunoglobulin. XI. Functional implications.
    Biochemistry. 1970 Aug 4;9(16):3197-205 PMID: 5489773
  6. Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins.
    Biochemistry. 1974 Jan 15;13(2):211-22 PMID: 4358939
  7. Prediction of protein conformation.
    Biochemistry. 1974 Jan 15;13(2):222-45 PMID: 4358940
  8. Localization of free and bound secretory component in human intestinal epithelial cells. A model for the assembly of secretory IgA.
    J Exp Med. 1974 Mar 1;139(3):629-42 PMID: 4204729
  9. Effector activating determinants on IgG. II. Differentiation of the combining sites for C1q from those for cytotoxic K cells and neutrophils by plasmin digestion of rabbits IgG.
    Immunology. 1974 Feb;26(2):303-10 PMID: 4277464
  10. Structural principles of the globular organization of protein chains. A stereochemical theory of globular protein secondary structure.
    J Mol Biol. 1974 Oct 5;88(4):857-72 PMID: 4427383
  11. Algorithms for prediction of alpha-helical and beta-structural regions in globular proteins.
    J Mol Biol. 1974 Oct 5;88(4):873-94 PMID: 4427384
  12. Biological activities of immunoglobulins of different classes and subclasses.
    Adv Immunol. 1974;19(0):259-94 PMID: 4611173
  13. Characterization of a plasmin-digest fragment of rabbit immunoglobulin gamma that binds antigen and complement.
    Biochem J. 1975 Feb;145(2):177-83 PMID: 239679
  14. Different degrees of interspecies homology in immunoglobulin lamda chain constant domain correlated with three-dimensional structure.
    Nature. 1975 Dec 18;258(5536):641-3 PMID: 813149
  15. Structure and function of immunoglobulin domains. V. Binding, University of immunoglobulin G and fragments to placental membrane preparations.
    J Immunol. 1976 Sep;117(3):882-8 PMID: 956658
  16. Structure and function of the constant regions of immunoglobulins.
    Q Rev Biophys. 1976 May;9(2):135-80 PMID: 785525
  17. Crystallographic structure studies of an IgG molecule and an Fc fragment.
    Nature. 1976 Dec 2;264(5585):415-20 PMID: 1004567
  18. Alignment statistic for identifying related protein sequences.
    J Mol Evol. 1977 Apr 29;9(2):121-30 PMID: 864719
  19. Rat thy-1 antigens from thymus and brain: their tissue distribution, purification, and chemical composition.
    Cold Spring Harb Symp Quant Biol. 1977;41 Pt 1:51-61 PMID: 70317
  20. Analysis of cell surfaces by xenogeneic myeloma-hybrid antibodies: differentiation antigens of rat lymphocytes.
    Cell. 1977 Nov;12(3):663-73 PMID: 303545
  21. Preliminary refinement and structural analysis of the Fab fragment from human immunoglobulin new at 2.0 A resolution.
    J Biol Chem. 1978 Jan 25;253(2):585-97 PMID: 618887
  22. Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins.
    J Mol Biol. 1978 Mar 25;120(1):97-120 PMID: 642007
  23. Amino acid sequence of the Fc region of a canine immunoglobulin M: interspecies homology for the IgM class.
    Science. 1978 Jun 9;200(4346):1159-61 PMID: 653360
  24. The beta bulge: a common small unit of nonrepetitive protein structure.
    Proc Natl Acad Sci U S A. 1978 Jun;75(6):2574-8 PMID: 275827
  25. The IgE-mast cell system as a paradigm for the study of antibody mechanisms.
    Immunol Rev. 1978;41:186-99 PMID: 360507
  26. Identification and unusual tissue distribution of the canine and human homologues of Thy-1 (theta).
    J Exp Med. 1979 Mar 1;149(3):576-91 PMID: 311810
  27. Three-dimensional structure of immunoglobulins.
    Annu Rev Biochem. 1979;48:961-97 PMID: 89832
  28. Structural similarities between Thy-1 antigen from rat brain and immunoglobulin.
    Nature. 1979 Nov 15;282(5736):341-2 PMID: 503212
  29. Distribution of immunoglobulin G receptors in the small intestine of the young rat.
    J Cell Biol. 1980 Apr;85(1):18-32 PMID: 7364873
  30. Structure and function of immunoglobulin domains. VIII. An analysis of the structural requirements in human IgG1 for binding to the Fc receptor of human monocytes.
    J Immunol. 1980 May;124(5):2186-90 PMID: 7365252
  31. Analysis and prediction of protein beta-sheet structures by a combinatorial approach.
    Nature. 1980 Jun 5;285(5764):378-82 PMID: 6991952
  32. Monoclonal antibodies to Ia antigens from rat thymus: cross reactions with mouse and human and use in purification of rat Ia glycoproteins.
    Immunol Rev. 1979;47:117-37 PMID: 398324
  33. The binding of human complement component C4 to antibody-antigen aggregates.
    Biochem J. 1980 Jul 1;189(1):67-80 PMID: 6906229
  34. An improved method of testing for evolutionary homology.
    J Mol Biol. 1966 Mar;16(1):9-16 PMID: 5917736
Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
1981-04-01
Pages
31-40
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1162852
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]