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PMID: 6174946 Published · ppublish English Journal Article

Characterisation of cauliflower mosaic virus DNA sequences which encode major polyadenylated transcripts.

Nucleic acids research ·Vol. 9 ·No. 24 ·1981-12-21 ·Pages 6735-47

Covey SN, Lomonossoff GP, Hull R

Abstract

Cauliflower mosaic virus DNA sequences which encode two major polyadenylated RNA species, the 1.9 kb messenger RNA for the 62,000 MW virus inclusion body polypeptide and 35S RNA, were mapped using the nuclease 51 procedure. The 1.9 kb RNA has an eleven nucleotide leader sequence transcribed from alpha-strand DNA located at co-ordinate 0.72 m.u. (map units), immediately upstream of the AUG initiation codon of reading frame VI. The 3'-end of 1.9 kb RNA maps at 0.95 m.u. and is co-terminal with the 3'-end of 35S RNA, a complete transcript of the DNA alpha-strand. The 5'-end of 35S RNA maps at 0.93 m.u. and is located upstream of the discontinuity G1 (zero m.u.) in the alpha-strand and some 200 nucleotides upstream of the sequence encoding its own 3'-terminus.

MeSH Terms
Base Sequence Chromosome Mapping DNA, Viral/genetics Endonucleases Mosaic Viruses/genetics Poly A/genetics RNA/genetics RNA, Messenger Single-Strand Specific DNA and RNA Endonucleases Transcription, Genetic
Chemicals
DNA, Viral RNA, Messenger Poly A RNA Endonucleases Single-Strand Specific DNA and RNA Endonucleases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Covey S N
Lomonossoff G P
Hull R
References (18)
18 references, click to expand
  1. The determination of the molecular weight of ribonucleic acid by polyacrylamide-gel electrophresis. The effects of changes in conformation.
    Biochem J. 1969 Jun;113(1):131-8 PMID: 4896715
  2. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  3. 3' non-coding region sequences in eukaryotic messenger RNA.
    Nature. 1976 Sep 16;263(5574):211-4 PMID: 822353
  4. Analysis of restriction fragments of T7 DNA and determination of molecular weights by electrophoresis in neutral and alkaline gels.
    J Mol Biol. 1977 Feb 15;110(1):119-46 PMID: 845942
  5. Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.
    Cell. 1977 Nov;12(3):721-32 PMID: 922889
  6. Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange.
    Proc Natl Acad Sci U S A. 1977 Nov;74(11):4835-8 PMID: 73185
  7. Conservation of the primary structure at the 3' end of 18S rRNA from eucaryotic cells.
    Cell. 1978 Mar;13(3):551-63 PMID: 77738
  8. AUG is the only recognisable signal sequence in the 5' non-coding regions of eukaryotic mRNA.
    Nature. 1978 Jul 6;274(5666):84-7 PMID: 662001
  9. Replication of cauliflower mosaic virus and transcription of its genome in turnip leaf protoplasts.
    Virology. 1978 May 15;86(2):468-81 PMID: 664242
  10. Studies on the single-stranded discontinuities of the cauliflower mosaic virus genome.
    Nucleic Acids Res. 1978 Aug;5(8):2913-25 PMID: 693323
  11. 3'-terminal nucleotide sequence of encephalomyocarditis virus RNA determined by reverse transcriptase and chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1978 Sep;75(9):4257-61 PMID: 81487
  12. Complete sequence of constant and 3' noncoding regions of an immunoglobulin mRNA using the dideoxynucleotide method of RNA sequencing.
    Cell. 1978 Nov;15(3):1067-75 PMID: 103625
  13. The polarity of the cauliflower mosaic virus genome.
    Nucleic Acids Res. 1979 Oct 10;7(3):669-77 PMID: 503842
  14. Transcription maps of polyoma virus-specific RNA: analysis by two-dimensional nuclease S1 gel mapping.
    Methods Enzymol. 1980;65(1):718-49 PMID: 6154876
  15. Nucleotide sequence of cauliflower mosaic virus DNA.
    Cell. 1980 Aug;21(1):285-94 PMID: 7407912
  16. Restriction map of native and cloned cauliflower mosaic virus DNA.
    Gene. 1980 Oct;11(1-2):21-31 PMID: 7002732
  17. The complete nucleotide sequence of an infectious clone of cauliflower mosaic virus by M13mp7 shotgun sequencing.
    Nucleic Acids Res. 1981 Jun 25;9(12):2871-88 PMID: 6269062
  18. Structure of polyoma virus late nuclear RNA.
    J Mol Biol. 1981 May 25;148(3):273-301 PMID: 6271970
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1981-12-21
Pages
6735-47
Language
English
Region
England
NLM ID
0411011
PMCID
PMC327637
Subset
IM
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