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PMID: 6283312 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

A DNA sequence containing the control regions of the malEFG and malK-lamB operons in Escherichia coli K12.

Molecular & general genetics : MGG ·Vol. 185 ·No. 1 ·1982-00-00 ·Pages 82-7

Bedouelle H, Hofnung M

Abstract

The malB region in E. coli is composed of two operons, malEFG and malK-lamB, transcribed divergently from a control region located between the malE and malK genes. We have established the DNA sequence of a 600 base pair segment which contains the sites necessary for initiation of transcription of the malB operons and the translation start sites for malE and malK. We have also determined the position of a 147 base pair deletion, malB delta 100, in this sequence. The control region contains two short segments (about 35 base pairs) showing unusual distributions of bases: the GC content (85%) is higher than average and most of the purines (85%) are on one strand. We discuss the possible relevance of this and other salient features of the DNA sequence to the mechanisms by which the expression of the malB region is positively regulated.

MeSH Terms
Base Composition Base Sequence Chromosomes, Bacterial/ultrastructure DNA Restriction Enzymes DNA, Bacterial/analysis Escherichia coli/ultrastructure Gene Expression Regulation Genes Operon Protein Biosynthesis Purine Nucleotides/metabolism
Chemicals
DNA, Bacterial Purine Nucleotides DNA Restriction Enzymes
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Bedouelle H
Hofnung M
References (39)
39 references, click to expand
  1. Regulatory sequences involved in the promotion and termination of RNA transcription.
    Annu Rev Genet. 1979;13:319-53 PMID: 94251
  2. Structure of the malB region in Escherichia coli K12. I. Genetic map of the malK-lamB operon.
    Mol Gen Genet. 1979 Jul 24;174(3):241-8 PMID: 384166
  3. Active transport of maltose in Escherichia coli K12. Involvement of a "periplasmic" maltose binding protein.
    Eur J Biochem. 1974 Aug 15;47(1):139-49 PMID: 4215651
  4. Molecuar model of the DNA interaction site for the cyclic AMP receptor protein.
    Proc Natl Acad Sci U S A. 1981 Apr;78(4):2213-7 PMID: 6941280
  5. Structure of the malB region in Escherichia coli K12. III. Correlation of the genetic map with the restriction map.
    Mol Gen Genet. 1979 Jul 24;174(3):261-7 PMID: 384168
  6. Functional implications of secondary structure analysis of wild type and mutant bacterial signal peptides.
    Prog Clin Biol Res. 1981;63:399-403 PMID: 7312870
  7. The ribosome binding sites recognized by E. coli ribosomes have regions with signal character in both the leader and protein coding segments.
    Nucleic Acids Res. 1980 Sep 11;8(17):3895-907 PMID: 7003539
  8. Electrophoretic strand separation of long DNAs with poly (U,G) in agarose gels.
    Nucleic Acids Res. 1978 Aug;5(8):2743-54 PMID: 99728
  9. DNA sequence encoding the NH2-terminal peptide involved in transport of lambda receptor, an Escherichia coli secretory protein.
    Proc Natl Acad Sci U S A. 1980 May;77(5):2621-5 PMID: 6446717
  10. Rho-independent termination: dyad symmetry in DNA causes RNA polymerase to pause during transcription in vitro.
    Nucleic Acids Res. 1981 Feb 11;9(3):563-77 PMID: 7012794
  11. Dominant constitutive mutations in malT, the positive regulator gene of the maltose regulon in Escherichia coli.
    J Mol Biol. 1978 Sep 15;124(2):359-71 PMID: 101676
  12. Identification of the malK gene product. A peripheral membrane component of the Escherichia coli maltose transport system.
    J Biol Chem. 1981 Jan 25;256(2):560-2 PMID: 6778869
  13. Mechanism of araC autoregulation and the domains of two overlapping promoters, Pc and PBAD, in the L-arabinose regulatory region of Escherichia coli.
    Proc Natl Acad Sci U S A. 1981 Feb;78(2):752-6 PMID: 6262769
  14. E. coli RNA polymerase interacts homologously with two different promoters.
    Cell. 1980 Jun;20(2):269-81 PMID: 6248238
  15. Nucleotide sequence of the rightward operator of phage lambda.
    Proc Natl Acad Sci U S A. 1975 Mar;72(3):1184-8 PMID: 1055375
  16. Divergent operons and the genetic structure of the maltose B region in Escherichia coli K12.
    Genetics. 1974 Feb;76(2):169-84 PMID: 4595640
  17. A relationship between DNA helix stability and recognition sites for RNA polymerase.
    Science. 1979 Aug 3;205(4405):508-11 PMID: 377494
  18. Structure of the malB region in Escherichia coli K12. II. Genetic map of the malE,F,G operon.
    Mol Gen Genet. 1979 Jul 24;174(3):249-59 PMID: 384167
  19. Gene sequence of the lambda receptor, an outer membrane protein of E. coli K12.
    Cell. 1981 Dec;27(3 Pt 2):507-14 PMID: 6086106
  20. Identification of a cytoplasmic membrane-associated component of the maltose transport system of Escherichia coli.
    J Biol Chem. 1980 Sep 25;255(18):8366-9 PMID: 6997295
  21. A rapid enzymatic DNA sequencing technique: determination of sequence alterations in early simian virus 40 temperature sensitive and deletion mutants.
    Nucleic Acids Res. 1980 May 24;8(10):2225-40 PMID: 6253881
  22. The use of thin acrylamide gels for DNA sequencing.
    FEBS Lett. 1978 Mar 1;87(1):107-10 PMID: 631324
  23. Improved estimation of secondary structure in ribonucleic acids.
    Nat New Biol. 1973 Nov 14;246(150):40-1 PMID: 4519026
  24. The araC regulatory gene mRNA contains a leader sequence.
    Mol Gen Genet. 1980;180(1):219-26 PMID: 6160371
  25. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  26. malB region in Escherichia coli K-12: specialized transducing bacteriophages and first restriction map.
    J Bacteriol. 1978 Dec;136(3):1109-19 PMID: 363689
  27. The use of gene fusions to study the expression of malT the positive regulator gene of the maltose regulon.
    J Mol Biol. 1979 Aug 15;132(3):521-34 PMID: 118263
  28. Denaturation maps of DNA: experimental and theoretical maps of phiX174 DNA.
    Nucleic Acids Res. 1978 Jul;5(7):2493-500 PMID: 566910
  29. A simple method for DNA restriction site mapping.
    Nucleic Acids Res. 1976 Sep;3(9):2387-98 PMID: 787937
  30. Complete nucleotide sequence of the Escherichia coli plasmid pBR322.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 1:77-90 PMID: 383387
  31. Comparison of partial denaturation maps with the known sequence of simian virus 40 and phi X174 replicative form DNA.
    J Mol Biol. 1979 Jun 25;131(2):331-40 PMID: 226718
  32. Complementation studies in the maltose-A region of the Escherichia coli K12 genetic map.
    J Mol Biol. 1971 Nov 14;61(3):681-94 PMID: 4943758
  33. Mutations which alter the function of the signal sequence of the maltose binding protein of Escherichia coli.
    Nature. 1980 May 8;285(5760):78-81 PMID: 6990274
  34. A DNA sequence containing the control sites for gene malT and for the malPQ operon.
    Mol Gen Genet. 1982;185(1):88-92 PMID: 6283313
  35. A method for sequencing restriction fragments with dideoxynucleoside triphosphates.
    Nucleic Acids Res. 1978 Dec;5(12):4537-45 PMID: 745989
  36. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  37. Escherichia coli mutants accumulating the precursor of a secreted protein in the cytoplasm.
    Nature. 1979 Feb 15;277(5697):538-41 PMID: 368649
  38. Sequences from the beginning of the fiber messenger RNA of adenovirus-2.
    J Mol Biol. 1979 Jun 25;131(2):341-52 PMID: 318165
  39. The adsorption of coliphage lambda to its host: effect of variations in the surface density of receptor and in phage-receptor affinity.
    J Mol Biol. 1976 May 25;103(3):521-36 PMID: 181582
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1982-00-00
Pages
82-7
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
Databases
GENBANK
J01639, J01648, K02117
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