Home LiteratureArticle Details
PMID: 6585825 Published · ppublish English Journal Article

Sequence of a cDNA clone encoding mouse glial fibrillary acidic protein: structural conservation of intermediate filaments.

Lewis SA, Balcarek JM, Krek V, Shelanski M, Cowan NJ

Abstract

A clone encoding mouse glial fibrillary acidic protein (GFAP) was isolated from a cDNA library constructed so as to express the cloned sequences. The library was screened using a GFAP-specific polyclonal antiserum; a single bacterial colony expressing GFAP was identified. The complete sequence of the cDNA insert in this clone is presented, encompassing 2.5 kilobases and specifying greater than 97% of the GFAP amino acid sequence. The clone includes a long (1.4-kilobase) 3' untranslated region. Within the coding region, the data show extensive homology with other intermediate filament proteins, particularly in those regions predicted to be alpha-helical. RNA blot transfer experiments using the cloned GFAP cDNA probe revealed a single GFAP mRNA species of 2.7 kilobases in mouse brain. Southern blot analysis indicates the existence of at most two genes encoding GFAP in the mouse genome. The mouse GFAP probe cross-hybridizes weakly at high stringency with genomic DNA from diverse eukaryotic species.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Biological Evolution DNA/genetics Intermediate Filament Proteins/genetics Mice Neuroglia/physiology RNA, Messenger/genetics
Chemicals
Intermediate Filament Proteins RNA, Messenger DNA
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Lewis S A
Balcarek J M
Krek V
Shelanski M
Cowan N J
References (20)
20 references, click to expand
  1. A new computer method for the storage and manipulation of DNA gel reading data.
    Nucleic Acids Res. 1980 Aug 25;8(16):3673-94 PMID: 7433103
  2. The amino acid sequence of chicken muscle desmin provides a common structural model for intermediate filament proteins.
    EMBO J. 1982;1(12):1649-56 PMID: 6202512
  3. Isolation and characterization of a soluble, immunoactive peptide of glial fibrillary acidic protein.
    Biochim Biophys Acta. 1981 Sep 29;670(2):139-45 PMID: 6794638
  4. Intermediate filaments.
    Cold Spring Harb Symp Quant Biol. 1982;46 Pt 1:413-29 PMID: 6179698
  5. Proteinchemical characterization of three structurally distinct domains along the protofilament unit of desmin 10 nm filaments.
    Cell. 1982 Aug;30(1):277-86 PMID: 6889923
  6. Identification of clones that encode chicken tropomyosin by direct immunological screening of a cDNA expression library.
    Proc Natl Acad Sci U S A. 1983 Jan;80(1):31-5 PMID: 6185958
  7. Complete amino acid sequence of a mouse epidermal keratin subunit and implications for the structure of intermediate filaments.
    Nature. 1983 Apr 28;302(5911):794-800 PMID: 6188955
  8. Primary and secondary structure of hamster vimentin predicted from the nucleotide sequence.
    Proc Natl Acad Sci U S A. 1983 Jun;80(12):3548-52 PMID: 6304716
  9. Studies on transformation of Escherichia coli with plasmids.
    J Mol Biol. 1983 Jun 5;166(4):557-80 PMID: 6345791
  10. Identification of two human beta-tubulin isotypes.
    Mol Cell Biol. 1983 May;3(5):854-62 PMID: 6865944
  11. Neurofilament architecture combines structural principles of intermediate filaments with carboxy-terminal extensions increasing in size between triplet proteins.
    EMBO J. 1983;2(8):1295-302 PMID: 10872323
  12. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  13. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  14. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  15. Intermediate filaments in nervous tissues.
    J Cell Biol. 1978 Dec;79(3):637-45 PMID: 83322
  16. Biogenesis of peroxisomes: intracellular site of synthesis of catalase and uricase.
    Proc Natl Acad Sci U S A. 1978 Oct;75(10):5066-70 PMID: 368807
  17. Intermediate filaments as mechanical integrators of cellular space.
    Nature. 1980 Jan 17;283(5744):249-256 PMID: 7188712
  18. Number and evolutionary conservation of alpha- and beta-tubulin and cytoplasmic beta- and gamma-actin genes using specific cloned cDNA probes.
    Cell. 1980 May;20(1):95-105 PMID: 6893015
  19. The cDNA sequence of a Type II cytoskeletal keratin reveals constant and variable structural domains among keratins.
    Cell. 1983 Jul;33(3):915-24 PMID: 6191871
  20. Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.
    J Mol Biol. 1980 Oct 25;143(2):161-78 PMID: 6260957
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1984-05-00
Pages
2743-6
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC345146
Subset
IM
Databases
GENBANK
K01347
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]