Abstract
1. Porphobilinogen deaminase [porphobilinogen ammonia-lyase (polymerizing), EC 4.3.1.8] from Euglena gracilis was purified more than 200-fold. 2. The enzyme has a molecular weight of 41 000 +/- 2000, does not contain a chromophoric prosthetic group, and appears not to require metal ions for activity. 3. The stoicheiometry of the overall reaction at pH 7.4 was shown to be: 4 Porphobilinogen leads to uroporphyrinogen-I + 4 NH4+. This stoicheiometry for porphobilinogen and uroporphyrinogen was also observed over a wide range of pH values. 4. Initial-velocity studies showed a hyperbolic dependence of velocity on substrate concentration, demonstrating the existence of a displacement-type mechanism. 5. Vmax. varied with pH as a typical bell-shaped curve, indicating that two ionizable groups with pK values of 6.1 and 8.9 are important for catalysis. A plot of Vmax./Km against pH showed a single ionization (pK 8.2) to influence binding of substrate.
MeSH Terms
Ammonia-Lyases/metabolism
Chromatography, DEAE-Cellulose
Euglena gracilis/enzymology
Hydrogen-Ion Concentration
Hydroxymethylbilane Synthase/isolation & purification,metabolism
Kinetics
Molecular Weight
Porphobilinogen/metabolism
Temperature
Chemicals
Porphobilinogen
Hydroxymethylbilane Synthase
Ammonia-Lyases
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Williams D C
Morgan G S
McDonald E
Battersby A R
References (22)
22 references, click to expand
-
Uroporphyrinogen 3 cosynthetase from mouse spleen.
Biochemistry. 1968 Nov;7(11):3781-8
PMID: 5722245
-
The enzymatic synthesis of porphyrins from porphobilinogen. II. Uroporphyrin III.
J Biol Chem. 1958 Aug;233(2):510-5
PMID: 13563529
-
The enzymatic synthesis of porphyrins from porphobilinogen. I. Uroporphyrin I.
J Biol Chem. 1958 Aug;233(2):501-9
PMID: 13563528
-
DISC ELECTROPHORESIS. II. METHOD AND APPLICATION TO HUMAN SERUM PROTEINS.
Ann N Y Acad Sci. 1964 Dec 28;121:404-27
PMID: 14240539
-
The biosynthesis of uroporphyrinogen III: order of assembly of the four porphobilinogen molecules in the formation of the tetrapyrrole ring.
FEBS Lett. 1979 Aug 15;104(2):364-6
PMID: 314389
-
The pH-dependence of second-order rate constants of enzyme modification may provide free-reactant pKa values.
Biochem J. 1977 Dec 1;167(3):859-62
PMID: 23769
-
Isolation and properties of wheat germ uroporphyrinogen 3 cosynthetase.
Biochim Biophys Acta. 1968 Feb 5;151(2):429-37
PMID: 5636375
-
A kinetic analysis of enzyme systems involving four substrates.
Biochem J. 1974 Sep;141(3):789-805
PMID: 4463962
-
Porphyrin biosynthesis. VI. Separation and purification of porphobilinogen deaminase and uroporphyrinogen isomerase from cow liver. Porphobilinogenase an allosteric enzyme.
Biochim Biophys Acta. 1969 Sep 30;191(1):130-43
PMID: 5823493
-
The occurrence and determination of delta-amino-levulinic acid and porphobilinogen in urine.
J Biol Chem. 1956 Mar;219(1):435-46
PMID: 13295297
-
Intermediates in the biosynthesis of porphyrins from porphobilinogen.
Science. 1955 Jun 17;121(3155):878-9
PMID: 14385801
-
Purification and properties of uroporphyrinogen I synthetase from Rhodopseudomonas spheroides.
J Biol Chem. 1973 Feb 10;248(3):1019-24
PMID: 4539746
-
A simple method for derivation of rate equations for enzyme-catalyzed reactions under the rapid equilibrium assumption or combined assumptions of equilibrium and steady state.
J Biol Chem. 1968 Feb 25;243(4):820-5
PMID: 5638598
-
The statistical analysis of enzyme kinetic data.
Adv Enzymol Relat Areas Mol Biol. 1967;29:1-32
PMID: 4881884
-
Polypyrroles formed from porphobilinogen and amines by uroporphyrinogen synthetase of Rhodopseudomonas spheroides.
Biochem J. 1973 Jul;133(3):471-92
PMID: 4542566
-
The purification and properties of uroporphyrinogen I synthases and uroporphyrinogen III cosynthase. Interactions between the enzymes.
Ann N Y Acad Sci. 1975 Apr 15;244:401-18
PMID: 1056172
-
Spectral-absorption coefficients of some porphyrins in the Soret-band region.
Biochem J. 1960 Jun;75(3):620-3
PMID: 16748818
-
Purification and properties of porphobilinogen deaminase from wheat germ.
Arch Biochem Biophys. 1970 Jan;136(1):193-202
PMID: 5417615
-
Enzymatic properties of uroporphyrinogen 3 cosynthetase.
Biochemistry. 1971 Dec 7;10(25):4669-75
PMID: 5140185
-
Purification and properties of uroporphyrinogen I synthase from human erythrocytes. Identification of stable enzyme-substrate intermediates.
J Biol Chem. 1980 Mar 10;255(5):1993-9
PMID: 7354069
-
Studies on porphobilinogen deaminase and uroporphyrinogen 3 cosynthase from human erythrocytes.
Biochim Biophys Acta. 1974 Jun 18;350(2):358-73
PMID: 4847568
-
Studies on plant amylases: The effect of starch concentration upon the velocity of hydrolysis by the amylase of germinated barley.
Biochem J. 1932;26(5):1406-21
PMID: 16744959