Home LiteratureArticle Details
PMID: 6935674 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Tissue-specific DNA methylation in a cluster of rabbit beta-like globin genes.

Shen CK, Maniatis T

Abstract

The relationship between DNA methylation and differential expression of rabbit beta-like globin genes was studied by using restriction enzymes that cleave the sequence C-C-G-G but are differentially inhibited by the presence of 5-methylcytosine. The methylation frequency of 13 C-C-G-G sites that flank a set of four closely linked rabbit beta-like globin genes was determined. This analysis revealed that certain sites surrounding embryonic and adult globin genes are relatively undermethylated in DNA from embryonic and adult erythroid tissues, respectively. This pattern is most pronounced for three sites that are undermethylated in erythroid cells but are totally methylated in nonerythroid cells. We conclude that the degree of CpG methylation in the rabbit beta-like globin gene cluster is correlated with gene activity, but the effect is confined to relatively small regions of DNA.

MeSH Terms
Animals Base Sequence DNA/genetics Erythropoiesis Gene Expression Regulation Genes Globins/genetics Methylation Rabbits Tissue Distribution
Chemicals
Globins DNA
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Shen C K
Maniatis T
References (27)
27 references, click to expand
  1. Detection of two restriction endonuclease activities in Haemophilus parainfluenzae using analytical agarose--ethidium bromide electrophoresis.
    Biochemistry. 1973 Jul 31;12(16):3055-63 PMID: 4354250
  2. The control of gene function in cell differentiation and in embryogenesis.
    Adv Cytopharmacol. 1971 May;1:13-24 PMID: 5163242
  3. Embryonic and fetal hemoglobin in animals.
    Ann N Y Acad Sci. 1974 Nov 29;241(0):653-71 PMID: 4139923
  4. DNA modification mechanisms and gene activity during development.
    Science. 1975 Jan 24;187(4173):226-32 PMID: 1111098
  5. Nucleotide sequence of the rightward operator of phage lambda.
    Proc Natl Acad Sci U S A. 1975 Mar;72(3):1184-8 PMID: 1055375
  6. X inactivation, differentiation, and DNA methylation.
    Cytogenet Cell Genet. 1975;14(1):9-25 PMID: 1093816
  7. Selective silencing of eukaryotic DNA.
    Science. 1975 Aug 8;189(4201):426-33 PMID: 1098145
  8. Embryonic epsilon chains of mice and rabbits.
    Nature. 1975 Oct 23;257(5528):714-6 PMID: 1186851
  9. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  10. A physical map of the DNA regions flanking the rabbit beta-globin gene.
    Cell. 1977 Oct;12(2):429-39 PMID: 912752
  11. Specificity of Hpa II and Hae III DNA methylases.
    Nucleic Acids Res. 1977 Dec;4(12):4211-21 PMID: 600794
  12. Use of restriction enzymes to study eukaryotic DNA methylation: I. The methylation pattern in ribosomal DNA from Xenopus laevis.
    J Mol Biol. 1978 Jan 5;118(1):27-47 PMID: 625056
  13. MspI, an isoschizomer of hpaII which cleaves both unmethylated and methylated hpaII sites.
    Nucleic Acids Res. 1978 Sep;5(9):3231-6 PMID: 704354
  14. The isolation of structural genes from libraries of eucaryotic DNA.
    Cell. 1978 Oct;15(2):687-701 PMID: 719759
  15. DNA methylation at a CCGG sequence in the large intron of the rabbit beta-globin gene: tissue-specific variations.
    Nucleic Acids Res. 1978 Dec;5(12):4631-4 PMID: 745990
  16. Methylation of mouse liver DNA studied by means of the restriction enzymes msp I and hpa II.
    Science. 1979 Mar 9;203(4384):1019-21 PMID: 424726
  17. Specific DNA methylation sites in the vicinity of the chicken beta-globin genes.
    Nature. 1979 Aug 2;280(5721):419-20 PMID: 460418
  18. Direct detection of methylated cytosine in DNA by use of the restriction enzyme MspI.
    Nucleic Acids Res. 1979;6(6):2125-32 PMID: 223125
  19. Comparison of total sequence of a cloned rabbit beta-globin gene and its flanking regions with a homologous mouse sequence.
    Science. 1979 Oct 19;206(4416):337-44 PMID: 482942
  20. Methylated and unmethylated DNA compartments in the sea urchin genome.
    Cell. 1979 Aug;17(4):889-901 PMID: 487434
  21. The linkage arrangement of four rabbit beta-like globin genes.
    Cell. 1979 Dec;18(4):1273-83 PMID: 519768
  22. The structure and transcription of four linked rabbit beta-like globin genes.
    Cell. 1979 Dec;18(4):1285-97 PMID: 519769
  23. DNA methylation: organ specific variations in the methylation pattern within and around ovalbumin and other chicken genes.
    Nucleic Acids Res. 1979 Dec 20;7(8):2081-103 PMID: 523314
  24. Methylation of DNA in mouse early embryos, teratocarcinoma cells and adult tissues of mouse and rabbit.
    Nucleic Acids Res. 1979 Dec 20;7(8):2369-85 PMID: 523320
  25. The organization of repetitive sequences in a cluster of rabbit beta-like globin genes.
    Cell. 1980 Feb;19(2):379-91 PMID: 6244107
  26. DNA methylation in the human gamma delta beta-globin locus in erythroid and nonerythroid tissues.
    Cell. 1980 Apr;19(4):947-58 PMID: 6247075
  27. The molecular genetics of human hemoglobins.
    Annu Rev Genet. 1980;14:145-78 PMID: 6452087
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1980-11-00
Pages
6634-8
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC350341
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]