Home LiteratureArticle Details
PMID: 7074188 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Quantitative characterization of the lateral distribution of membrane proteins within the lipid bilayer.

Biophysical journal ·Vol. 37 ·No. 3 ·1982-03-00 ·Pages 617-24

Freire E, Snyder B

Abstract

The dependence of the lateral distribution of membrane proteins on the size, protein/lipoid molar ratio, and the magnitude of the interaction potentials has been investigated by computer modeling protein-lipid distributions with Monte Carlo calculations. These results have allowed us to develop a quantitative characterization of the distribution of membrane proteins and to correlate these distributions with experimental observables. The topological arrangement of protein domains, protein plus annular lipid domains, and free lipid domains is described in terms of radial distribution, pair connectedness, and cluster distribution functions. The radial distribution functions are used to measure the distribution of intermolecular distances between protein molecules, whereas the pair connectedness functions are used to estimate the physical extension of compositional domains. It is shown that, at characteristic protein/lipid molar ratios, previously isolated domains become connected, forming domain networks that extend over the entire membrane surface. These changes in the lateral connectivity of compositional domains are paralleled by changes in the calculated lateral diffusion coefficients and might have important implications for the regulation of diffusion controlled processes within the membrane.

MeSH Terms
Computers Lipid Bilayers/analysis Mathematics Membrane Proteins/analysis Monte Carlo Method
Chemicals
Lipid Bilayers Membrane Proteins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Freire E
Snyder B
References (20)
20 references, click to expand
  1. Evidence for boundary lipid in membranes.
    Proc Natl Acad Sci U S A. 1973 Feb;70(2):480-4 PMID: 4346892
  2. Lateral phase separation in phospholipid membranes.
    Biochemistry. 1973 Jun 5;12(12):2351-60 PMID: 4351059
  3. Direct observation of domains in wet lipid bilayers.
    Science. 1975 Oct 24;190(4212):383-4 PMID: 1179216
  4. Studies on membrane fusion. II. Induction of fusion in pure phospholipid membranes by calcium ions and other divalent metals.
    Biochim Biophys Acta. 1976 Oct 5;448(2):265-83 PMID: 822885
  5. Genetic control of membrane mosaicism.
    J Supramol Struct. 1976;5(3):381-9 PMID: 799216
  6. Interactions of helical polypepetide segments which span the hydrocarbon region of lipid bilayers. Studies of the gramicidin A lipid-water system.
    J Mol Biol. 1977 Jul 5;113(3):517-38 PMID: 69714
  7. The planar distributions of surface proteins and intramembrane particles in Acholeplasma laidlawii are differentially affected by the physical state of membrane lipids.
    Biochim Biophys Acta. 1978 Apr 20;508(3):431-49 PMID: 638151
  8. Protein--immobilized lipid in dimyristoylphosphatidylcholine-substituted cytochrome oxidase: evidence for both boundary and trapped-bilayer lipid.
    Biochem Biophys Res Commun. 1978 Mar 30;81(2):397-402 PMID: 208520
  9. Comparative studies on the effects of pH and Ca2+ on bilayers of various negatively charged phospholipids and their mixtures with phosphatidylcholine.
    Biochim Biophys Acta. 1978 Sep 11;512(1):84-96 PMID: 29665
  10. Thermotropic behavior of monoglucocerebroside--dipalmitoylphosphatidylcholine multilamellar liposomes.
    Biochemistry. 1979 Feb 6;18(3):442-5 PMID: 581743
  11. Nuclear magnetic resonance investigation of the cytochrome oxidase--phospholipid interaction: a new model for boundary lipid.
    Biochemistry. 1979 Jul 24;18(15):3257-67 PMID: 223629
  12. Deuterium nuclear magnetic resonance studies of the interaction between dimyristoylphosphatidylcholine and gramicidin A'.
    Biochemistry. 1979 Jul 24;18(15):3272-9 PMID: 88958
  13. Correlative statistical analysis and computer modelling of intramembraneous particle distributions in human erythrocyte membranes.
    Biochim Biophys Acta. 1979 Nov 2;557(2):265-82 PMID: 497182
  14. Estimation of the lateral distribution of molecules in two-component lipid bilayers.
    Biochemistry. 1980 Jan 8;19(1):88-94 PMID: 7352982
  15. Protein-lipid interaction. Biophysical studies of (Ca2+ + Mg2+)-ATPase reconstituted systems.
    Biochim Biophys Acta. 1980 Jun 6;598(3):502-16 PMID: 6104512
  16. Monte Carlo studies of the lateral organization of molecules in two-component lipid bilayers.
    Biochim Biophys Acta. 1980 Aug 14;600(3):643-54 PMID: 7407137
  17. Compositional domain structure in phosphatidylcholine--cholesterol and sphingomyelin--cholesterol bilayers.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):4055-9 PMID: 6933455
  18. Effect of cholesterol in membranes. Pulsed nuclear magnetic resonance measurements of lipid lateral diffusion.
    Biochemistry. 1981 Apr 14;20(8):2204-7 PMID: 7236591
  19. Dynamical and temperature-dependent effects of lipid-protein interactions. Application of deuterium nuclear magnetic resonance and electron paramagnetic resonance spectroscopy to the same reconstitutions of cytochrome c oxidase.
    Biochemistry. 1981 May 26;20(11):3152-62 PMID: 6264951
  20. Lateral diffusion in inhomogeneous membranes. Model membranes containing cholesterol.
    Biophys J. 1980 Jun;30(3):383-97 PMID: 6894875
Article Info
Journal
Biophysical journal
Abbr.
Biophys J
ISSN
0006-3495
Published
1982-03-00
Pages
617-24
Language
English
Region
United States
NLM ID
0370626
PMCID
PMC1328846
Subset
IM
Grants
NIGMS NIH HHS · GM-26894 · United States
NIGMS NIH HHS · GM-27244 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]