Complete nucleotide sequence of alfalfa mosaic virus RNA 4.
Alfalfa mosaic virus RNA 4, the subgenomic messenger for viral coat protein, was partially digested with RNase T1 or RNase A and the sequence of a number of fragments was deduced by in vitro labeling with polynucleotide kinase and application of RNA sequencing techniques. From overlapping fragments, the complete primary sequence of the 881 nucleotides of RNA 4 was constructed: the coding region of 660 nucleotides (not including the initiation and termination codon) is flanked by a 5' noncoding region of 39 nucleotides and a 3' noncoding region of 182 nucleotides. The RNA sequencing data completely confirm the amino acid sequence of the coat protein as deduced by Van Beynum et al. (Fur.J. Biochem. 72, 63-78, 1977).
19 references, click to expand
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Studies on sequence homology between the RNA's of alfalfa mosaic virus.Virology. 1975 May;65(1):1-15 PMID: 1146224
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Structural studies on the coat protein of alfalfa mosaic virus. The complete primary structure.Eur J Biochem. 1977 Jan 3;72(1):63-78 PMID: 836394
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New rapid gel sequencing method for RNA.Nature. 1977 Oct 27;269(5631):833-6 PMID: 927512
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End labeling of enzymatically decapped mRNA.Nucleic Acids Res. 1977 Dec;4(12):4165-74 PMID: 202926
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Nucleotide sequence of 5' terminus of alfalfa mosaic virus RNA 4 leading into coat protein cistron.Proc Natl Acad Sci U S A. 1977 Dec;74(12):5504-8 PMID: 271973
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Sequence analysis of 5'[32P] labeled mRNA and tRNA using polyacrylamide gel electrophoresis.Nucleic Acids Res. 1978 Jan;5(1):37-56 PMID: 25417
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Coat protein binds to the 3'-terminal part of RNA 4 of alfalfa mosaic virus.Biochemistry. 1978 Jul 11;17(14):2927-33 PMID: 99164
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Nucleotide sequence of turnip yellow mosaic virus coat protein mRNA.Cell. 1978 Sep;15(1):113-22 PMID: 699035
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Alfalfa mosaic virus RNA. Determination of the sequence homology between the four RNA species and a comparison with the four RNA species of cucumber mosaic virus.Eur J Biochem. 1978 Nov 2;91(1):269-78 PMID: 720343
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Translation of alfalfa-mosaic-virus RNA 1 in the mRNA-dependent translation system from rabbit reticulocyte lysates.Eur J Biochem. 1979 Feb 1;93(3):461-8 PMID: 217681
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3'-Terminal nucleotide sequence of alfalfa mosaic virus RNA 4.Proc Natl Acad Sci U S A. 1979 Mar;76(3):1114-7 PMID: 108677
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Sequence of 1000 nucleotides at the 3' end of tobacco mosaic virus RNA.Nucleic Acids Res. 1979 Apr;6(4):1287-308 PMID: 109810
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Rapid RNA sequencing: nucleases from Staphylococcus aureus and Neurospora crassa discriminate between uridine and cytidine.Nucleic Acids Res. 1979 Aug 10;6(11):3481-90 PMID: 158747
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Sequence homology at the 3'-ends of alfalfa mosaic virus RNAs.FEBS Lett. 1979 Nov 1;107(1):61-5 PMID: 499559
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Translation by Escherichia coli ribosomes of alfalfa mosaic virus RNA 4 can be initiated at two sites on the monocistronic message.Eur J Biochem. 1979 Nov 1;101(1):123-33 PMID: 389629
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The primary structure of the coat protein of alfalfa mosaic virus strain VRU. A hypothesis on the occurrence of two conformations in the assembly of the protein shell.Eur J Biochem. 1979 Dec;102(1):125-38 PMID: 520317
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Sequence homology at the 3'-termini of the four RNAs of alfalfa mosaic virus.FEBS Lett. 1980 Jan 1;109(1):145-50 PMID: 7353626
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Nucleotide sequence of the 3'-noncoding region of alfalfa mosaic virus RNA 4 and its homology with the genomic RNAs.Nucleic Acids Res. 1979 Dec 11;7(7):1887-900 PMID: 537914
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