Home LiteratureArticle Details
PMID: 7575400 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Cloning and analysis of the promoter region of the rat SM22 alpha gene.

The Biochemical journal ·Vol. 310 ( Pt 3) ·1995-09-15 ·Pages 1037-43

Kemp PR, Osbourn JK, Grainger DJ, Metcalfe JC

Abstract

We have cloned and sequenced a 1.9 kb fragment of the 5'-upstream sequence of the smooth-muscle-specific gene SM22 alpha. The region cloned consisted of the SM22 alpha promoter, a 65 bp exon containing most of the 5'-untranslated region and 307 bp of the first intron. A 1.5 kb fragment at the 5' end of this sequence was able to drive the expression of a reporter chloramphenicol acetyltransferase (CAT) gene in both vascular smooth-muscle cells and Rat-1 fibroblasts. This promoter region did not contain a consensus TATAA box but contained the sequence TTTAAA 25 bp from the major start site identified by primer extension. Deletion analysis showed that a fragment of the promoter from +65 to -303 was more active in both cell types than the 1.5 kb fragment suggesting that there are silencer sequences in the region 5' to the core promoter. CAT activity was also observed with fragments containing bases +65 to -193 and +65 to -117 in smooth-muscle cells. In contrast with the smooth-muscle cells, no CAT activity was detected in Rat-1 fibroblasts with the smallest two fragments. The residual promoter activity in the smallest fragment of the SM22 alpha promoter tested suggested that, unlike the smooth-muscle alpha-actin promoter, transcription from the SM22 alpha promoter can occur in smooth-muscle cells in the absence of factors binding to CC(A/Trich)6GG (CArG box) or CANNTG (E box) motifs.

MeSH Terms
Animals Base Sequence Binding Sites Blotting, Northern Cell Line Cells, Cultured Chloramphenicol O-Acetyltransferase/biosynthesis Cloning, Molecular Consensus Sequence DNA Primers DNA-Binding Proteins/metabolism Exons Genomic Library Introns Microfilament Proteins Molecular Sequence Data Muscle Proteins/biosynthesis,genetics Muscle, Smooth, Vascular/metabolism Polymerase Chain Reaction Promoter Regions, Genetic RNA, Messenger/analysis,biosynthesis Rats/genetics Recombinant Proteins/biosynthesis Restriction Mapping Sequence Deletion TATA Box Transcription, Genetic Transfection
Chemicals
DNA Primers DNA-Binding Proteins Microfilament Proteins Muscle Proteins RNA, Messenger Recombinant Proteins Tagln protein, mouse transgelin Chloramphenicol O-Acetyltransferase
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Kemp P R
Department of Biochemistry, Cambridge University, U.K.
Osbourn J K
Grainger D J
Metcalfe J C
References (26)
26 references, click to expand
  1. Structure and complete nucleotide sequence of the chicken alpha-smooth muscle (aortic) actin gene. An actin gene which produces multiple messenger RNAs.
    J Biol Chem. 1986 Jul 5;261(19):8965-76 PMID: 3013870
  2. A regulatory element downstream of the rat SM22 alpha gene transcription start point enhances reporter gene expression in vascular smooth muscle cells.
    Gene. 1995 Mar 10;154(2):249-53 PMID: 7890172
  3. Identification and characterization of a factor that binds to two human sarcomeric actin promoters.
    J Biol Chem. 1989 Jan 15;264(2):1284-92 PMID: 2910853
  4. The sarcomeric actin CArG-binding factor is indistinguishable from the c-fos serum response factor.
    Mol Cell Biol. 1989 Feb;9(2):515-22 PMID: 2710114
  5. MyoD is a sequence-specific DNA binding protein requiring a region of myc homology to bind to the muscle creatine kinase enhancer.
    Cell. 1989 Sep 8;58(5):823-31 PMID: 2550138
  6. Structure of the human smooth muscle alpha-actin gene. Analysis of a cDNA and 5' upstream region.
    J Biol Chem. 1990 Jan 25;265(3):1683-7 PMID: 2295650
  7. M-CAT binding factor, a novel trans-acting factor governing muscle-specific transcription.
    Mol Cell Biol. 1990 Aug;10(8):4271-83 PMID: 2370866
  8. The 5'-flanking region of the mouse vascular smooth muscle alpha-actin gene contains evolutionarily conserved sequence motifs within a functional promoter.
    J Biol Chem. 1990 Sep 25;265(27):16667-75 PMID: 2398068
  9. In vivo footprint and methylation analysis by PCR-aided genomic sequencing: comparison of active and inactive X chromosomal DNA at the CpG island and promoter of human PGK-1.
    Genes Dev. 1990 Aug;4(8):1277-87 PMID: 2227409
  10. The myoD gene family: nodal point during specification of the muscle cell lineage.
    Science. 1991 Feb 15;251(4995):761-6 PMID: 1846704
  11. Molecular cloning and sequence analysis of smooth muscle calponin.
    J Biol Chem. 1991 Jul 15;266(20):13284-8 PMID: 2071603
  12. A large accumulation of non-muscle myosin occurs at first entry into M phase in rat vascular smooth-muscle cells.
    Biochem J. 1991 Jul 1;277 ( Pt 1):145-51 PMID: 1854330
  13. The Id gene is activated by serum but is not required for de-differentiation in rat vascular smooth muscle cells.
    Biochem J. 1991 Jul 1;277 ( Pt 1):285-8 PMID: 1854341
  14. Gene cloning and nucleotide sequence of SM22 alpha from the chicken gizzard smooth muscle.
    Biochem Int. 1991 Mar;23(4):663-8 PMID: 1872880
  15. Elements of the smooth muscle alpha-actin promoter required in cis for transcriptional activation in smooth muscle. Evidence for cell type-specific regulation.
    J Biol Chem. 1992 Jan 15;267(2):984-9 PMID: 1730687
  16. A novel gene encoding a smooth muscle protein is overexpressed in senescent human fibroblasts.
    Biochem Biophys Res Commun. 1992 Aug 31;187(1):1-7 PMID: 1520290
  17. Isolation of gene markers of differentiated and proliferating vascular smooth muscle cells.
    Circ Res. 1993 Jul;73(1):193-204 PMID: 8508530
  18. cDNA cloning and mRNA expression of calponin and SM22 in rat aorta smooth muscle cells.
    Gene. 1993 Aug 25;130(2):297-302 PMID: 8359698
  19. Inhibition of PDGF BB stimulated DNA synthesis in rat aortic vascular smooth muscle cells by the expression of a truncated PDGF beta receptor.
    FEBS Lett. 1993 Dec 20;336(1):119-23 PMID: 8262192
  20. Molecular organization of the rat glia-derived nexin/protease nexin-1 promoter.
    Gene Expr. 1993;3(2):163-74 PMID: 8268720
  21. Calponin and SM 22 as differentiation markers of smooth muscle: spatiotemporal distribution during avian embryonic development.
    Differentiation. 1993 Dec;55(1):1-11 PMID: 8299876
  22. Purification, characterization, and partial sequence analysis of a new 25-kDa actin-binding protein from bovine aorta: a SM22 homolog.
    Biochem Biophys Res Commun. 1994 Feb 15;198(3):1275-80 PMID: 8117285
  23. Suppression of Ras transformation by serum response factor.
    J Biol Chem. 1994 May 13;269(19):13740-3 PMID: 8188648
  24. Cloning and sequencing of cDNAs encoding the actin cross-linking protein transgelin defines a new family of actin-associated proteins.
    Cell Motil Cytoskeleton. 1994;28(3):243-55 PMID: 7954852
  25. Identification of functional promoter elements in the rabbit smooth muscle myosin heavy chain gene.
    J Biol Chem. 1994 Dec 2;269(48):30538-45 PMID: 7982972
  26. An abundant and novel protein of 22 kDa (SM22) is widely distributed in smooth muscles. Purification from bovine aorta.
    Biochem J. 1987 Jun 15;244(3):705-9 PMID: 3446186
Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
1995-09-15
Pages
1037-43
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1135999
Subset
IM
Grants
Wellcome Trust · United Kingdom
Databases
GENBANK
Z48607
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]