Home LiteratureArticle Details
PMID: 7825590 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Multiple glucose 6-phosphate dehydrogenase-deficient variants correlate with malaria endemicity in the Vanuatu archipelago (southwestern Pacific).

American journal of human genetics ·Vol. 56 ·No. 1 ·1995-01-00 ·Pages 294-301

Ganczakowski M, Town M, Bowden DK, Vulliamy TJ, Kaneko A, Clegg JB, Weatherall DJ, Luzzatto L

Abstract

In studying the relationship between genetic abnormalities of red blood cells and malaria endemicity in the Vanuatu archipelago in the southwestern Pacific, we have found that of 1,442 males tested, 98 (6.8%) were G6PD deficient. The prevalence of GdPD deficiency varied widely (0%-39%), both from one island to another and in different parts of the same island, and generally correlated positively with the degree of malaria transmission. The properties of G6PD from GdPD-deficient subjects were analyzed in a subset of 53 samples. In all cases the residual red-blood-cell activity was < 10%. There were three phenotypic patterns. PCR amplification and sequencing of the entire coding region of the G6PD gene showed that the first of these patterns corresponded to G6PD Union (nucleotide 1360C-->T; amino acid 454Arg-->Cys), previously encountered elsewhere. Analysis of samples exhibiting the second pattern revealed two new mutants: G6PD Vanua Lava (nucleotide 383T-->C; amino acid 128Leu-->Pro) and G6PD Namoru (nucleotide 208T-->C; amino acid 70Tyr-->His); in three samples, the underlying mutation has not yet been identified. Analysis of the sample exhibiting the third pattern revealed another new mutant: G6PD Naone (nucleotide 497G-->A; amino acid 166Arg-->His). Of the four mutations, G6PD Union and G6PD Vanua Lava have a polymorphic frequency in more than one island; and G6PD Vanua Lava has also been detected in a sample from Papua New Guinea. G6PD deficiency is of clinical importance in Vanuatu because it is a cause of neonatal jaundice and is responsible for numerous episodes of drug-induced acute hemolytic anemia.

Related Genes
GPD
MeSH Terms
Adolescent Adult Anemia, Hemolytic/chemically induced,genetics Base Sequence Child Child, Preschool Cluster Analysis DNA Mutational Analysis Female Genetic Predisposition to Disease Glucosephosphate Dehydrogenase/genetics Glucosephosphate Dehydrogenase Deficiency/epidemiology,genetics Humans Infant Infant, Newborn Jaundice, Neonatal/chemically induced,genetics Malaria/epidemiology Male Middle Aged Molecular Sequence Data Neonatal Screening Point Mutation Polymerase Chain Reaction Polymorphism, Single-Stranded Conformational Prevalence Selection, Genetic Vanuatu/epidemiology X Chromosome
Chemicals
Glucosephosphate Dehydrogenase
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Ganczakowski M
Institute of Molecular Medicine, John Radcliffe Hospital, Oxford, United Kingdom.
Town M
Bowden D K
Vulliamy T J
Kaneko A
Clegg J B
Weatherall D J
Luzzatto L
References (25)
25 references, click to expand
  1. Isolation of human glucose-6-phosphate dehydrogenase (G6PD) cDNA clones: primary structure of the protein and unusual 5' non-coding region.
    Nucleic Acids Res. 1986 Mar 25;14(6):2511-22 PMID: 3515319
  2. Relative roles of genetic factors, dietary deficiency, and infection in anaemia in Vanuatu, South-West Pacific.
    Lancet. 1985 Nov 9;2(8463):1025-8 PMID: 2865513
  3. Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction.
    Genomics. 1989 Nov;5(4):874-9 PMID: 2687159
  4. Identification of a single base change in a new human mutant glucose-6-phosphate dehydrogenase gene by polymerase-chain-reaction amplification of the entire coding region from genomic DNA.
    Biochem J. 1990 Oct 1;271(1):157-60 PMID: 2222408
  5. Analysis of CpG suppression in methylated and nonmethylated species.
    Proc Natl Acad Sci U S A. 1992 Feb 1;89(3):957-61 PMID: 1736311
  6. Molecular heterogeneity underlying the G6PD Mediterranean phenotype.
    Hum Genet. 1992 Mar;88(6):688-90 PMID: 1551674
  7. The molecular basis of glucose-6-phosphate dehydrogenase deficiency.
    Trends Genet. 1992 Apr;8(4):138-43 PMID: 1631957
  8. A novel C to T substitution at nucleotide 1360 of cDNA which abolishes a natural Hha I site accounts for a new G6PD deficiency gene in Chinese.
    Hum Mol Genet. 1992 Jun;1(3):205 PMID: 1303180
  9. Genetic heterogeneity of glucose-6-phosphate dehydrogenase deficiency revealed by single-strand conformation and sequence analysis.
    Am J Hum Genet. 1993 Mar;52(3):527-36 PMID: 8447319
  10. Acute intravascular haemolysis in Vanuatu following a single dose of primaquine in individuals with glucose-6-phosphate dehydrogenase deficiency.
    J Trop Med Hyg. 1992 Oct;95(5):349-51 PMID: 1404560
  11. G6PD haplotypes spanning Xq28 from F8C to red/green color vision.
    Genomics. 1993 Jul;17(1):6-14 PMID: 8104869
  12. Frequency of glucose-6-phosphate dehydrogenase (G6PD) mutations in Chinese, Filipinos, and Laotians from Hawaii.
    Hum Genet. 1993 Nov;92(5):470-6 PMID: 8244337
  13. The glucose-6-phosphate dehydrogenase (G6PD) deficient variant G6PD Union (454 Arg-->Cys) has a worldwide distribution possibly due to recurrent mutation.
    Hum Mol Genet. 1994 May;3(5):833-5 PMID: 8081374
  14. Standardization of procedures for the study of glucose-6-phosphate dehydrogenase. Report of a WHO Scientific Group.
    World Health Organ Tech Rep Ser. 1967;366:1-53 PMID: 4963040
  15. A Philippino glucose-6-phosphate dehydrogenase variant (G6PD Union) with enzyme deficiency and altered substrate specificity.
    Blood. 1970 Apr;35(4):506-13 PMID: 4392654
  16. Survey for erythrocyte glucose-6-phosphate dehydrogenase deficiency in Fiji.
    Am J Hum Genet. 1973 Jan;25(1):36-41 PMID: 4684505
  17. Haptoglobin, hemopexin, hemoglobin and hematocrit in newborns with erythrocyte glucose-6-phosphate dehydrogenase deficiency.
    Acta Haematol. 1975;54(5):284-8 PMID: 809968
  18. Genetics of red cells and susceptibility to malaria.
    Blood. 1979 Nov;54(5):961-76 PMID: 387115
  19. Further evidence for heterogeneity of glucose-6-phosphate dehydrogenase deficiency in Papua New Guinea.
    Hum Genet. 1980;56(2):209-12 PMID: 7450778
  20. Erythrocyte enzymopathies in the newborn.
    Clin Haematol. 1981 Feb;10(1):31-55 PMID: 7011626
  21. Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.
    J Mol Biol. 1980 Oct 25;143(2):161-78 PMID: 6260957
  22. Glucose-6-phosphate dehydrogenase deficiency in Papua New Guinea. The description of 13 new variants.
    Hum Genet. 1982;60(2):189-92 PMID: 7076260
  23. DNA in heritable disease.
    Lancet. 1983 Oct 1;2(8353):787-8 PMID: 6137617
  24. Melanesians and Polynesians share a unique alpha-thalassemia mutation.
    Am J Hum Genet. 1985 May;37(3):571-80 PMID: 2988335
  25. Characterization of G6PD deficiency and thalassaemia in Papua New Guinea.
    P N G Med J. 1986 Mar;29(1):53-8 PMID: 3489336
Article Info
Journal
American journal of human genetics
Abbr.
Am J Hum Genet
ISSN
0002-9297
Published
1995-01-00
Pages
294-301
Language
English
Region
United States
NLM ID
0370475
PMCID
PMC1801293
Subset
IM
Grants
Wellcome Trust · United Kingdom
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]