Abstract
The influenza virus NS1 protein inhibits the nuclear export of a spliced viral mRNA, NS2 mRNA (F. V. Alonso-Caplen, M. E. Nemeroff, Y. Qiu, and R. M. Krug, Genes Dev. 6:255-267, 1992). To identify the sequence in NS2 mRNA that is recognized by the NS1 protein, we developed a gel shift assay for the formation of specific RNA-protein complexes. With this assay, it was established that the NS1 protein binds to the poly(A) sequence at the 3' end of NS2 mRNA and of other mRNAs. In addition, the NS1 protein was shown to bind to poly(A) itself. This specificity was also observed in vivo. The NS1 protein inhibited the nuclear export of every poly(A)-containing mRNA that was tested. In contrast, the NS1 protein failed to inhibit the nuclear export of an mRNA whose 3' end was generated by cleavage without subsequent addition of poly(A). Addition of poly(A) to this mRNA enabled the NS1 protein to inhibit mRNA export. The implications of these results for the role of the NS1 protein during virus infection are discussed.
MeSH Terms
Binding, Competitive
Biological Transport
Cell Nucleus/metabolism
Models, Biological
Orthomyxoviridae/metabolism
Poly A/metabolism
Protein Binding
RNA, Messenger/metabolism
RNA-Binding Proteins/metabolism
Ribonucleoproteins/metabolism
Viral Nonstructural Proteins/metabolism
Chemicals
INS1 protein, influenza virus
RNA, Messenger
RNA-Binding Proteins
Ribonucleoproteins
Viral Nonstructural Proteins
Poly A
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Qiu Y
Department of Molecular Biology and Biochemistry, Rutgers University, Piscataway, New Jersey 08855-1179.
Krug R M
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