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PMID: 8186097 Published · ppublish English Comparative Study Journal Article

A comparison of 16S ribosomal DNA sequences from five isolates of Helicobacter pylori.

International journal of systematic bacteriology ·Vol. 44 ·No. 2 ·1994-04-00 ·Pages 320-3

Eckloff BW, Podzorski RP, Kline BC, Cockerill FR

Abstract

Other workers have found that clinical isolates of Helicobacter pylori exhibit very extensive DNA sequence polymorphisms when they are examined by ribotyping or some other genomic sequence characterization technique. In fact, it is rare to find similar clones, much less identical ones, among isolates. We found that the levels of divergence between the 16S ribosomal DNA sequences of individual organisms and the consensus sequence of the five isolates which we examined ranged from 0.2 to 0.5%. In contrast, other workers have shown that levels of divergence between the 16S ribosomal DNA sequence of H. pylori and the 16S ribosomal DNA sequences of four other Helicobacter species range from 2.7 to 8.0%. Our results show that the H. pylori 16S ribosomal DNA is not very polymorphic and support the conclusion that H. pylori is a unique species.

MeSH Terms
Base Sequence Consensus Sequence DNA, Bacterial/genetics DNA, Ribosomal/genetics Genetic Variation Helicobacter pylori/genetics Molecular Sequence Data RNA, Ribosomal, 16S/genetics Sequence Analysis, DNA Sequence Homology, Nucleic Acid
Chemicals
DNA, Bacterial DNA, Ribosomal RNA, Ribosomal, 16S
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Eckloff B W
Department of Biochemistry and Molecular Biology, Mayo Clinic and Foundation, Rochester, Minnesota 55905.
Podzorski R P
Kline B C
Cockerill F R
Article Info
Journal
International journal of systematic bacteriology
Abbr.
Int J Syst Bacteriol
ISSN
0020-7713
Published
1994-04-00
Pages
320-3
Language
English
Region
England
NLM ID
0042143
Subset
IM
Databases
GENBANK
M55303, M55304, M55305, M55306, M55307, M55308, M55309, M88157, U01328, U01329, U01330, U01331, U01332
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