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PMID: 8255754 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

A tRNA gene transcription initiation site is similar to mRNA and rRNA promoters in plant mitochondria.

Nucleic acids research ·Vol. 21 ·No. 22 ·1993-11-11 ·Pages 5012-9

Binder S, Brennicke A

Abstract

The gene for tRNA(Phe) is located 292 nucleotides upstream of the tRNA(Pro) gene in the Oenothera mitochondrial genome. Hybridization with in vitro capped primary transcripts indicates a transcription initiation site in the 5' region of the gene for tRNA(Phe). Primer extension experiments show the presence of precursor transcripts covering tRNA(Phe) and adjacent sequences up to a transcription initiation site 181 or 180 nucleotides upstream of the tRNA gene. The genomic sequence at this transcription initiation site contains the consensus motif derived for putative promoters of mitochondrial protein and rRNA coding genes in dicotyledonous plants. This sequence similarity suggests that tRNAs, rRNAs and mRNAs can be transcribed from homologous promoters in plant mitochondria.

MeSH Terms
Base Sequence DNA, Mitochondrial/genetics DNA-Directed RNA Polymerases/metabolism Molecular Sequence Data Plants/genetics Promoter Regions, Genetic RNA, Messenger/genetics RNA, Ribosomal/genetics RNA, Transfer, Phe/genetics RNA, Transfer, Pro/genetics Recombination, Genetic Restriction Mapping Transcription, Genetic
Chemicals
DNA, Mitochondrial RNA, Messenger RNA, Ribosomal RNA, Transfer, Phe RNA, Transfer, Pro DNA-Directed RNA Polymerases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Binder S
Institut für Genbiologische Forschung, Berlin, Germany.
Brennicke A
References (22)
22 references, click to expand
  1. Mitochondrial DNA.
    Sci Am. 1983 Mar;248(3):78-89 PMID: 6188212
  2. In vitro transcription and promoter strength analysis of five mitochondrial tRNA promoters in yeast.
    J Biol Chem. 1986 Feb 25;261(6):2905-11 PMID: 3512544
  3. Eukaryotic nuclear RNA polymerases.
    Annu Rev Biochem. 1975;44:613-38 PMID: 1094919
  4. The 110-kDa polypeptide of spinach plastid DNA-dependent RNA polymerase: single-subunit enzyme or catalytic core of multimeric enzyme complexes?
    Proc Natl Acad Sci U S A. 1993 Jun 15;90(12):5509-13 PMID: 8516293
  5. Numerous transcription initiation sites exist for the maize mitochondrial genes for subunit 9 of the ATP synthase and subunit 3 of cytochrome oxidase.
    Proc Natl Acad Sci U S A. 1988 Nov;85(21):7998-8002 PMID: 2903498
  6. Sequence analysis of the tRNA(Tyr) and tRNA(Lys) genes and evidence for the transcription of a chloroplast-like tRNA(Met) in maize mitochondria.
    Curr Genet. 1989 Sep;16(3):195-201 PMID: 2598275
  7. RNA processing and multiple transcription initiation sites result in transcript size heterogeneity in maize mitochondria.
    Mol Gen Genet. 1988 Mar;211(3):373-80 PMID: 2897071
  8. Transcription of the mammalian mitochondrial genome.
    Annu Rev Biochem. 1984;53:573-94 PMID: 6383200
  9. Identification and in vitro capping of a primary transcript of human mitochondrial DNA.
    J Biol Chem. 1984 Mar 25;259(6):3909-15 PMID: 6323446
  10. Mitochondrial RNA polymerase: dual role in transcription and replication.
    Trends Genet. 1989 May;5(5):149-54 PMID: 2667219
  11. Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant.
    Proc Natl Acad Sci U S A. 1992 Nov 15;89(22):10648-52 PMID: 1332054
  12. The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression.
    EMBO J. 1986 Sep;5(9):2043-2049 PMID: 16453699
  13. Transcription initiation sites in mitochondria of Oenothera berteriana.
    J Biol Chem. 1993 Apr 15;268(11):7849-55 PMID: 7681829
  14. Chloroplast rps15 and the rpoB/C1/C2 gene cluster are strongly transcribed in ribosome-deficient plastids: evidence for a functioning non-chloroplast-encoded RNA polymerase.
    EMBO J. 1993 Feb;12(2):563-71 PMID: 8440246
  15. Nucleotide sequence of a wheat mitochondrial lysine tRNA gene.
    Biochim Biophys Acta. 1989 Aug 14;1008(3):355-6 PMID: 2758033
  16. In vitro processing of mitochondrial and plastid derived tRNA precursors in a plant mitochondrial extract.
    Nucleic Acids Res. 1990 Mar 25;18(6):1401-6 PMID: 2326185
  17. Nuclear gadgets in mitochondrial DNA replication and transcription.
    Trends Biochem Sci. 1991 Mar;16(3):107-11 PMID: 2057998
  18. Identification of multiple transcriptional initiation sites on the yeast mitochondrial genome by in vitro capping with guanylyltransferase.
    J Biol Chem. 1983 Nov 25;258(22):14025-33 PMID: 6315717
  19. RNA editing in trans-splicing intron sequences of nad2 mRNAs in Oenothera mitochondria.
    J Biol Chem. 1992 Apr 15;267(11):7615-23 PMID: 1559998
  20. Genes for tRNA(Gly), tRNA(His), tRNA(Lys), tRNA(Phe), tRNA(Ser) and tRNA(Tyr) are encoded in Oenothera mitochondrial DNA.
    Curr Genet. 1990 Apr;17(4):353-8 PMID: 2340595
  21. Processing of transfer RNA precursors in a wheat mitochondrial extract.
    J Biol Chem. 1990 Aug 15;265(23):13782-91 PMID: 1696257
  22. Characterization of transcription initiation sites on the soybean mitochondrial genome allows identification of a transcription-associated sequence motif.
    Mol Gen Genet. 1991 Sep;228(3):345-55 PMID: 1716724
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1993-11-11
Pages
5012-9
Language
English
Region
England
NLM ID
0411011
PMCID
PMC310611
Subset
IM
Databases
GENBANK
X74449, X74450
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