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PMID: 8332524 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

The ribosomal database project.

Nucleic acids research ·Vol. 21 ·No. 13 ·1993-07-01 ·Pages 3021-3

Larsen N, Olsen GJ, Maidak BL, McCaughey MJ, Overbeek R, Macke TJ, Marsh TL, Woese CR

Abstract

The Ribosomal Database Project (RDP) is a curated database that offers ribosome data along with related programs and services. The offerings include phylogenetically ordered alignments of ribosomal RNA (rRNA) sequences, derived phylogenetic trees, rRNA secondary structure diagrams and various software packages for handling, analyzing and displaying alignments and trees. The data are available via ftp and electronic mail. Certain analytic services are also provided by the electronic mail server.

MeSH Terms
Databases, Factual Information Storage and Retrieval Nucleic Acid Conformation Phylogeny RNA, Ribosomal/genetics Software
Chemicals
RNA, Ribosomal
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Larsen N
Department of Microbiology, University of Illinois, Urbana 61801.
Olsen G J
Maidak B L
McCaughey M J
Overbeek R
Macke T J
Marsh T L
Woese C R
References (5)
5 references, click to expand
  1. Evolutionary trees from DNA sequences: a maximum likelihood approach.
    J Mol Evol. 1981;17(6):368-76 PMID: 7288891
  2. Interactive analysis of phylogeny and character evolution using the computer program MacClade.
    Folia Primatol (Basel). 1989;53(1-4):190-202 PMID: 2606395
  3. Compilation of small ribosomal subunit RNA sequences.
    Nucleic Acids Res. 1992 May 11;20 Suppl:2075-89 PMID: 1375995
  4. The EMBL Data Library.
    Nucleic Acids Res. 1992 May 11;20 Suppl:2071-4 PMID: 1598236
  5. GenBank.
    Nucleic Acids Res. 1992 May 11;20 Suppl:2065-9 PMID: 1598235
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
DOI
10.1093/nar/21.13.3021
Published
1993-07-01
Pages
3021-3
Language
English
Region
England
NLM ID
0411011
PMCID
PMC309730
Subset
IM
External Links
PubMed source DOI: 10.1093/nar/21.13.3021 PMC Full Text View journal details
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