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PMID: 8442386 Published · ppublish English Journal Article

A yeast antiviral protein, SKI8, shares a repeated amino acid sequence pattern with beta-subunits of G proteins and several other proteins.

Yeast (Chichester, England) ·Vol. 9 ·No. 1 ·1993-01-00 ·Pages 43-51

Matsumoto Y, Sarkar G, Sommer SS, Wickner RB

Abstract

SKI8 is a yeast antiviral gene, essential for controlling the propagation of M double-stranded RNA (dsRNA) and thus for preventing virus-induced cytopathology. Our DNA sequence of SKI8 shows that it encodes a 397 amino acid protein containing two copies of a 31 amino acid repeat pattern first identified in mammalian beta-transducin and Cdc4p of yeast. There are also four copies of this repeat in yeast Mak11p, necessary for M dsRNA propagation, and three copies in the putative product of the Dictyostelium AAC3 gene. Analysis of 36 cases of the repeat unit shows they have a consensus predicted structure: N-helix-sheet-turn-sheet-turn-sheet-helix-C.

Related Genes
MeSH Terms
Amino Acid Sequence Base Sequence DNA, Fungal/chemistry,genetics Fungal Proteins/chemistry,genetics GTP-Binding Proteins/chemistry Genes, Fungal Genome, Fungal Molecular Sequence Data Protein Structure, Secondary Repetitive Sequences, Nucleic Acid Saccharomyces cerevisiae/chemistry,genetics Saccharomyces cerevisiae Proteins Sequence Homology, Amino Acid Transducin/chemistry
Chemicals
DNA, Fungal Fungal Proteins SKI8 protein, S cerevisiae Saccharomyces cerevisiae Proteins GTP-Binding Proteins Transducin
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Matsumoto Y
Section on Genetics of Simple Eukaryotes, National Institute of Diabetes, Digestive and Kidney Diseases, N.I.H., Bethesda, MD 20892.
Sarkar G
Sommer S S
Wickner R B
Article Info
Journal
Yeast (Chichester, England)
Abbr.
Yeast
ISSN
0749-503X
Published
1993-01-00
Pages
43-51
Language
English
Region
England
NLM ID
8607637
Subset
IM
Databases
GENBANK
M96058
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