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PMID: 8464078 Published · ppublish English Comparative Study Journal Article

Prokaryotic members of a new family of putative helicases with similarity to transcription activator SNF2.

Journal of molecular biology ·Vol. 230 ·No. 2 ·1993-03-20 ·Pages 684-8

Kolstø AB, Bork P, Kvaløy K, Lindback T, Grønstadt A, Kristensen T, Sander C

Abstract

Cloning and sequence analysis of a new open reading frame from Bacillus cereus reveals the relationship to a recently identified family of putative eukaryotic transcription activators similar to the yeast SNF2 gene product. As a result of comparative analysis of sequence features conserved in all members of this family, a gene from a chilo iridescent virus, as well as a putative helicase from Escherichia coli (hepA), can also be grouped into this family. The unexpected presence of prokaryotic and viral sequences in the previously purely eukaryotic SNF2 family suggests a defined subgroup of DNA helicases present in all species, with specific function in transcription activation.

MeSH Terms
Adenosine Triphosphatases Amino Acid Sequence Animals Bacillus cereus/genetics,metabolism DNA Helicases/genetics DNA-Binding Proteins/genetics Databases, Factual Fungal Proteins/genetics Genes, Fungal Humans Molecular Sequence Data Multigene Family Nuclear Proteins Open Reading Frames Phylogeny Saccharomyces cerevisiae/genetics Saccharomyces cerevisiae Proteins Sequence Homology, Amino Acid Trans-Activators/genetics Transcription Factors/genetics
Chemicals
DNA-Binding Proteins Fungal Proteins Nuclear Proteins SMARCA1 protein, human SMARCA2 protein, human Saccharomyces cerevisiae Proteins Trans-Activators Transcription Factors Adenosine Triphosphatases SMARCA4 protein, human SNF2 protein, S cerevisiae DNA Helicases
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Kolstø A B
University of Oslo, Biotechnology Centre, Norway.
Bork P
Kvaløy K
Lindback T
Grønstadt A
Kristensen T
Sander C
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
0022-2836
Published
1993-03-20
Pages
684-8
Language
English
Region
England
NLM ID
2985088R
Subset
IM
Databases
GENBANK
M81388
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