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PMID: 8483901 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Predicting protein diffusion coefficients.

Brune D, Kim S

Abstract

Diffusion coefficients for proteins in water are predicted. The numerical method developed is general enough to be applied to a wide range of protein surface shapes, from rodlike to globular. Results are presented for lysozyme and tobacco mosaic virus, and they are compared with actual data and with predictions made by less general methods.

MeSH Terms
Diffusion Mathematics Models, Molecular Models, Theoretical Muramidase/chemistry Protein Conformation Proteins/chemistry Water
Chemicals
Proteins Water Muramidase
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Brune D
Department of Chemical Engineering, University of Wisconsin, Madison 53705.
Kim S
References (4)
4 references, click to expand
  1. Hydration of proteins and polypeptides.
    Adv Protein Chem. 1974;28:239-345 PMID: 4598824
  2. Frictional models for stochastic simulations of proteins.
    Biopolymers. 1988 Jun;27(6):1001-14 PMID: 3401553
  3. On an exact starting expression for macromolecular hydrodynamic models.
    Biopolymers. 1986 Apr;25(4):627-37 PMID: 3708107
  4. Hydrodynamic properties of complex, rigid, biological macromolecules: theory and applications.
    Q Rev Biophys. 1981 Feb;14(1):81-139 PMID: 7025081
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1993-05-01
Pages
3835-9
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC46400
Subset
IM
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