Home LiteratureArticle Details
PMID: 8495192 Published · ppublish English Journal Article Review

The curious case of protein splicing: mechanistic insights suggested by protein semisynthesis.

Protein science : a publication of the Protein Society ·Vol. 2 ·No. 5 ·1993-05-00 ·Pages 697-705

Wallace CJ

Abstract

The gradual accumulation of examples of protein splicing, in which a nested intervening sequence is spliced out of the interior of a polyprotein precursor, suggests that this curious phenomenon might prove to have universal phylogenetic distribution and biological significance. The known examples are reviewed, with the aim of establishing underlying patterns, and a generalized mechanism of autocatalytic protein splicing is proposed. The testable consequences of such a proposal and the possible evolutionary origins of the phenomenon are discussed.

MeSH Terms
Amino Acid Sequence Concanavalin A/biosynthesis DNA-Directed DNA Polymerase/biosynthesis Endodeoxyribonucleases/biosynthesis Models, Biological Molecular Sequence Data Protein Precursors/metabolism Protein Processing, Post-Translational Proton-Translocating ATPases Rec A Recombinases/biosynthesis Saccharomyces cerevisiae Proteins
Chemicals
Protein Precursors Saccharomyces cerevisiae Proteins Concanavalin A Rec A Recombinases Tli polymerase DNA-Directed DNA Polymerase Endodeoxyribonucleases Proton-Translocating ATPases VMA1 protein, S cerevisiae
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Wallace C J
Department of Biochemistry, Dalhousie University, Halifax, Nova Scotia, Canada.
References (30)
30 references, click to expand
  1. Spontaneous re-formation of a broken peptide chain.
    Nature. 1974 Jan 25;247(5438):202-4 PMID: 4543964
  2. Protein splicing removes intervening sequences in an archaea DNA polymerase.
    Nucleic Acids Res. 1992 Dec 11;20(23):6153-7 PMID: 1475179
  3. Enzymatic resynthesis of the hydrolyzed peptide bond(s) in ribonuclease S.
    Biochemistry. 1979 Feb 20;18(4):586-92 PMID: 33699
  4. Selectivity of intracellular proteolysis: protein substrates activate the ATP-dependent protease (La).
    Science. 1986 Apr 25;232(4749):500-3 PMID: 2938257
  5. Implications of the picornavirus capsid structure for polyprotein processing.
    Proc Natl Acad Sci U S A. 1987 Jan;84(1):21-5 PMID: 3467351
  6. Purification of two high molecular weight proteases from rabbit reticulocyte lysate.
    J Biol Chem. 1987 Jun 15;262(17):8303-13 PMID: 3298229
  7. The exon theory of genes.
    Cold Spring Harb Symp Quant Biol. 1987;52:901-5 PMID: 2456887
  8. Ubiquitin-mediated protein degradation.
    J Biol Chem. 1988 Oct 25;263(30):15237-40 PMID: 2844803
  9. Chemical synthesis of peptides and proteins.
    Annu Rev Biochem. 1988;57:957-89 PMID: 3052294
  10. Protein engineering of cytochrome c by semisynthesis: substitutions at glutamic acid 66.
    Protein Eng. 1986 Oct-Nov;1(1):23-7 PMID: 2907133
  11. Protein engineering by chemical means?
    Protein Eng. 1987 Jun;1(3):151-7 PMID: 3333844
  12. Traffic and assembly of concanavalin A.
    Trends Biochem Sci. 1988 Feb;13(2):60-4 PMID: 3070848
  13. Conformation-directed recombination of enzyme-activated peptide fragments: a simple and efficient means to protein engineering. Its use in the creation of cytochrome c analogues for structure-function studies.
    J Biol Chem. 1989 May 25;264(15):8764-70 PMID: 2542287
  14. Two structural genes on different chromosomes are required for encoding the major subunit of human red cell glucose-6-phosphate dehydrogenase.
    Cell. 1989 Aug 11;58(3):595-606 PMID: 2758468
  15. Substitutions engineered by chemical synthesis at three conserved sites in mitochondrial cytochrome c. Thermodynamic and functional consequences.
    J Biol Chem. 1989 Sep 15;264(26):15199-209 PMID: 2475497
  16. Structure of the gene encoding concanavalin A from Canavalia gladiata and its expression in Escherichia coli cells.
    FEBS Lett. 1990 Jan 15;260(1):127-30 PMID: 2404793
  17. Molecular structure of a gene, VMA1, encoding the catalytic subunit of H(+)-translocating adenosine triphosphatase from vacuolar membranes of Saccharomyces cerevisiae.
    J Biol Chem. 1990 Apr 25;265(12):6726-33 PMID: 2139027
  18. Origin of "fused" glucose-6-phosphate dehydrogenase.
    Cell. 1990 Jul 13;62(1):11-2 PMID: 1694726
  19. Primary structure requirements for the maturation in vivo of penicillin acylase from Escherichia coli ATCC 11105.
    Eur J Biochem. 1990 Aug 28;192(1):143-51 PMID: 2205499
  20. Purification of a site-specific endonuclease, I-Sce II, encoded by intron 4 alpha of the mitochondrial coxI gene of Saccharomyces cerevisiae.
    J Biol Chem. 1990 Nov 5;265(31):18976-82 PMID: 2172241
  21. Protein splicing converts the yeast TFP1 gene product to the 69-kD subunit of the vacuolar H(+)-adenosine triphosphatase.
    Science. 1990 Nov 2;250(4981):651-7 PMID: 2146742
  22. Site-directed alteration of the active-site residues of histidine decarboxylase from Clostridium perfringens.
    Biochemistry. 1990 Nov 13;29(45):10413-8 PMID: 2261482
  23. Transpeptidation during the analytical proteolysis of proteins.
    Anal Biochem. 1991 Jul;196(1):39-45 PMID: 1888034
  24. Functional role of heme ligation in cytochrome c. Effects of replacement of methionine 80 with natural and non-natural residues by semisynthesis.
    J Biol Chem. 1992 Feb 25;267(6):3852-61 PMID: 1310985
  25. Prokaryotic polyprotein precursors.
    FEBS Lett. 1992 Jul 27;307(1):62-5 PMID: 1639196
  26. The role of the pro-sequence in the processing and secretion of the thermolysin-like neutral protease from Bacillus cereus.
    Mol Microbiol. 1992 Jun;6(12):1593-604 PMID: 1495388
  27. Mutations at the putative junction sites of the yeast VMA1 protein, the catalytic subunit of the vacuolar membrane H(+)-ATPase, inhibit its processing by protein splicing.
    Biochem Biophys Res Commun. 1992 Oct 15;188(1):40-7 PMID: 1417861
  28. Protein introns: a new home for endonucleases.
    Cell. 1992 Oct 16;71(2):183-6 PMID: 1330319
  29. Protein splicing in the maturation of M. tuberculosis recA protein: a mechanism for tolerating a novel class of intervening sequence.
    Cell. 1992 Oct 16;71(2):201-10 PMID: 1423588
  30. Synthesis of peptide bonds by proteinases. Addition of organic cosolvents shifts peptide bond equilibria toward synthesis.
    Biochemistry. 1978 Nov 28;17(24):5220-7 PMID: 31906
Article Info
Journal
Protein science : a publication of the Protein Society
Abbr.
Protein Sci
ISSN
0961-8368
Published
1993-05-00
Pages
697-705
Language
English
Region
United States
NLM ID
9211750
PMCID
PMC2142502
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]