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PMID: 9016537 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

IMGT, the international ImMunoGeneTics database.

Nucleic acids research ·Vol. 25 ·No. 1 ·1997-01-01 ·Pages 206-11

Giudicelli V, Chaume D, Bodmer J, Müller W, Busin C, Marsh S, Bontrop R, Marc L, Malik A, Lefranc MP

Abstract

IMGT, the international ImMunoGeneTics database, is an integrated database specializing in immunoglobulins, T-cell receptors (TcR) and major histocompatibility complex (MHC) of all vertebrate species, initiated and co-ordinated by Marie-Paule Lefranc, CNRS, Montpellier II University, Montpellier, France ([email protected]). IMGT includes two databases: LIGM-DB (for immunoglobulins and TcR) and MHC/HLA-DB. IMGT comprises expertly annotated sequences and alignment tables. LIGM-DB contains more than 19 000 immunoglobulin and TcR sequences from 78 species. MHC/HLA-DB contains class I and class II human leukocyte antigen alignment tables. An IMGT tool, DNAPLOT, developed for immunoglobulins, TcR and MHC sequence alignments, is also available. IMGT works in close collaboration with the EMBL database. IMGT goals are to establish a common data access to all immunogenetics data, including sequences, oligonucleotide primers, gene maps and other genetic data of immunoglobulins, TcR and MHC molecules, and to provide a graphical user-friendly data access. IMGT will have important implications in medical research (repertoire in autoimmune diseases, AIDS, leukemias, lymphomas), therapeutical approaches (antibody engineering), genome diversity and genome evolution studies. IMGT can be accessed at http://imgt.cnusc.fr:8104 and http://www.ebi.ac.uk/IMGT

MeSH Terms
Amino Acid Sequence Base Sequence Computer Communication Networks Data Collection Databases, Factual Genes/genetics Genes, Immunoglobulin/genetics Humans Major Histocompatibility Complex/genetics Molecular Sequence Data Receptors, Antigen, T-Cell/genetics
Chemicals
Receptors, Antigen, T-Cell
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
Giudicelli V
Laboratoire d'ImmunoGénétique Moléculaire, LIGM, UMR CNRS 5535, BP5051, 1919 route de Mende, 34033 Montpellier Cedex 1, France.
Chaume D
Bodmer J
Müller W
Busin C
Marsh S
Bontrop R
Marc L
Malik A
Lefranc M P
References (6)
6 references, click to expand
  1. Organization of the human T-cell receptor genes.
    Eur Cytokine Netw. 1990 Aug-Sep;1(3):121-30 PMID: 2129796
  2. Molecular biological databases: the challenge of the genome era.
    Prog Biophys Mol Biol. 1991;56(3):215-45 PMID: 1771233
  3. The SWISS-PROT protein sequence data bank and its new supplement TREMBL.
    Nucleic Acids Res. 1996 Jan 1;24(1):21-5 PMID: 8594581
  4. GenBank.
    Nucleic Acids Res. 1996 Jan 1;24(1):1-5 PMID: 8594554
  5. The European Bioinformatics Institute (EBI) databases.
    Nucleic Acids Res. 1996 Jan 1;24(1):6-12 PMID: 8594602
  6. LIGM-DB/IMGT: an integrated database of Ig and TcR, part of the immunogenetics database.
    Ann N Y Acad Sci. 1995 Sep 29;764:47-9 PMID: 7486568
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1997-01-01
Pages
206-11
Language
English
Region
England
NLM ID
0411011
PMCID
PMC146384
Subset
IM
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