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PMID: 9074925 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

X chromosome map at 75-kb STS resolution, revealing extremes of recombination and GC content.

Genome research ·Vol. 7 ·No. 3 ·1997-03-00 ·Pages 210-22

Nagaraja R, MacMillan S, Kere J, Jones C, Griffin S, Schmatz M, Terrell J, Shomaker M, Jermak C, Hott C, Masisi M, Mumm S, Srivastava A, Pilia G, Featherstone T, Mazzarella R, Kesterson S, McCauley B, Railey B, Burough F, Nowotny V, D'Urso M, States D, Brownstein B, Schlessinger D

Abstract

A YAC/STS map of the X chromosome has reached an inter-STS resolution of 75 kb. The map density is sufficient to provide YACs or other large-insert clones that are cross-validated as sequencing substrates across the chromosome. Marker density also permits estimates of regional gene content and a detailed comparison of genetic and physical map distances. Five regions are detected with relatively high G + C, correlated with gene richness; and a 17-Mb region with very low recombination is revealed between the Xq13.3 [XIST] and Xq21.3 XY homology loci.

MeSH Terms
Base Composition/genetics Chromosome Mapping/methods Chromosomes, Artificial, Yeast/genetics Cytosine Nucleotides/genetics DNA, Complementary/genetics Gene Expression/genetics Genomic Library Guanine Nucleotides/genetics Humans Sequence Tagged Sites X Chromosome/genetics
Chemicals
Cytosine Nucleotides DNA, Complementary Guanine Nucleotides
Authors & Affiliations
25 authors, click to expand affiliations / ORCID
Nagaraja R
Center for Genetics in Medicine, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
MacMillan S
Kere J
Jones C
Griffin S
Schmatz M
Terrell J
Shomaker M
Jermak C
Hott C
Masisi M
Mumm S
Srivastava A
Pilia G
Featherstone T
Mazzarella R
Kesterson S
McCauley B
Railey B
Burough F
Nowotny V
D'Urso M
States D
Brownstein B
Schlessinger D
Article Info
Journal
Genome research
Abbr.
Genome Res
ISSN
1088-9051
Published
1997-03-00
Pages
210-22
Language
English
Region
United States
NLM ID
9518021
Subset
IM
Grants
NHGRI NIH HHS · HG00201 · United States
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