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PMID: 9261401 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Effects of nucleocapsid mutations on human immunodeficiency virus assembly and RNA encapsidation.

Journal of virology ·Vol. 71 ·No. 9 ·1997-09-00 ·Pages 6765-76

Zhang Y, Barklis E

Abstract

The human immunodeficiency virus (HIV) Pr55Gag precursor proteins direct virus particle assembly. While Gag-Gag protein interactions which affect HIV assembly occur in the capsid (CA) domain of Pr55Gag, the nucleocapsid (NC) domain, which functions in viral RNA encapsidation, also appears to participate in virus assembly. In order to dissect the roles of the NC domain and the p6 domain, the C-terminal Gag protein domain, we examined the effects of NC and p6 mutations on virus assembly and RNA encapsidation. In our experimental system, the p6 domain did not appear to affect virus release efficiency but p6 deletions and truncations reduced the specificity of genomic HIV-1 RNA encapsidation. Mutations in the nucleocapsid region reduced particle release, especially when the p2 interdomain peptide or the amino-terminal portion of the NC region was mutated, and NC mutations also reduced both the specificity and the efficiency of HIV-1 RNA encapsidation. These results implicated a linkage between RNA encapsidation and virus particle assembly or release. However, we found that the mutant ApoMTRB, in which the nucleocapsid and p6 domains of HIV-1 Pr55Gag were replaced with the Bacillus subtilis MtrB protein domain, released particles efficiently but packaged no detectable RNA. These results suggest that, for the purposes of virus-like particle assembly and release, NC can be replaced by a protein that does not appear to encapsidate RNA.

MeSH Terms
Animals COS Cells Gene Products, gag/genetics,metabolism HIV-1/genetics,physiology Humans Mutation Nucleocapsid/genetics,metabolism Protein Precursors/genetics,metabolism RNA, Viral/metabolism Virion Virus Assembly gag Gene Products, Human Immunodeficiency Virus
Chemicals
Gene Products, gag Protein Precursors RNA, Viral gag Gene Products, Human Immunodeficiency Virus gag protein p1, Human immunodeficiency virus p55 gag precursor protein, Human immunodeficiency virus 1 p6 gag protein, Human immunodeficiency virus 1
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Zhang Y
Vollum Institute for Advanced Biomedical Research, Oregon Health Sciences University, Portland 97201-3098, USA.
Barklis E
References (71)
71 references, click to expand
  1. Specific binding of HIV-1 nucleocapsid protein to PSI RNA in vitro requires N-terminal zinc finger and flanking basic amino acid residues.
    EMBO J. 1994 Apr 1;13(7):1525-33 PMID: 8156990
  2. Assembly of HIV GAG-B-galactosidase fusion proteins into virus particles.
    Virology. 1994 May 1;200(2):524-34 PMID: 8178440
  3. An assembly domain of the Rous sarcoma virus Gag protein required late in budding.
    J Virol. 1994 Oct;68(10):6605-18 PMID: 8083996
  4. The activity of the protease of human immunodeficiency virus type 1 is initiated at the membrane of infected cells before the release of viral proteins and is required for release to occur with maximum efficiency.
    J Virol. 1994 Oct;68(10):6782-6 PMID: 8084015
  5. The central globular domain of the nucleocapsid protein of human immunodeficiency virus type 1 is critical for virion structure and infectivity.
    J Virol. 1995 Mar;69(3):1778-84 PMID: 7853517
  6. RNA secondary structure and binding sites for gag gene products in the 5' packaging signal of human immunodeficiency virus type 1.
    J Virol. 1995 Apr;69(4):2101-9 PMID: 7884856
  7. Sequence requirements for encapsidation of deletion mutants and chimeras of human immunodeficiency virus type 1 Gag precursor into retrovirus-like particles.
    J Virol. 1995 Apr;69(4):2366-77 PMID: 7884882
  8. trans-acting proteins involved in RNA encapsidation and viral assembly in human immunodeficiency virus type 1.
    J Virol. 1996 Feb;70(2):880-6 PMID: 8551627
  9. The human immunodeficiency virus type 1 encapsidation site is a multipartite RNA element composed of functional hairpin structures.
    J Virol. 1996 May;70(5):2963-73 PMID: 8627772
  10. Structural analysis of human immunodeficiency virus type 1 Gag protein interactions, using cysteine-specific reagents.
    J Virol. 1996 Aug;70(8):5106-14 PMID: 8764018
  11. Characterization of Moloney murine leukemia virus mutants with single-amino-acid substitutions in the Cys-His box of the nucleocapsid protein.
    J Virol. 1989 Apr;63(4):1558-68 PMID: 2926863
  12. The protease and gag gene products of the human immunodeficiency virus: authentic cleavage and post-translational modification in an insect cell expression system.
    Virology. 1989 May;170(1):107-16 PMID: 2655272
  13. Identification of a sequence required for efficient packaging of human immunodeficiency virus type 1 RNA into virions.
    J Virol. 1989 Sep;63(9):4085-7 PMID: 2760989
  14. Role of capsid precursor processing and myristoylation in morphogenesis and infectivity of human immunodeficiency virus type 1.
    Proc Natl Acad Sci U S A. 1989 Aug;86(15):5781-5 PMID: 2788277
  15. Assembly and release of HIV-1 precursor Pr55gag virus-like particles from recombinant baculovirus-infected insect cells.
    Cell. 1989 Oct 6;59(1):103-12 PMID: 2676191
  16. Human immunodeficiency virus-like particles produced by a vaccinia virus expression vector.
    Proc Natl Acad Sci U S A. 1989 Nov;86(22):8964-7 PMID: 2479031
  17. Molecular biology of HIV: new insights into the virus life-cycle.
    AIDS. 1989;3 Suppl 1:S19-34 PMID: 2558687
  18. Production of human immunodeficiency virus (HIV)-like particles from cells infected with recombinant vaccinia viruses carrying the gag gene of HIV.
    Virology. 1990 Mar;175(1):139-48 PMID: 1689917
  19. Mutations of RNA and protein sequences involved in human immunodeficiency virus type 1 packaging result in production of noninfectious virus.
    J Virol. 1990 May;64(5):1920-6 PMID: 2109098
  20. Assembly of gag-beta-galactosidase proteins into retrovirus particles.
    J Virol. 1990 May;64(5):2265-79 PMID: 2109101
  21. Human immunodeficiency virus-like, nonreplicating, gag-env particles assemble in a recombinant vaccinia virus expression system.
    J Virol. 1990 Jun;64(6):2653-9 PMID: 2186175
  22. Human immunodeficiency virus type 1 Pr55gag and Pr160gag-pol expressed from a simian virus 40 late replacement vector are efficiently processed and assembled into viruslike particles.
    J Virol. 1990 Jun;64(6):2743-50 PMID: 1692347
  23. Noninfectious human immunodeficiency virus type 1 mutants deficient in genomic RNA.
    J Virol. 1990 Jul;64(7):3207-11 PMID: 2191147
  24. Point mutations in the proximal Cys-His box of Rous sarcoma virus nucleocapsid protein.
    J Virol. 1990 Oct;64(10):4978-87 PMID: 2168981
  25. Properties of avian retrovirus particles defective in viral protease.
    J Virol. 1990 Oct;64(10):5076-92 PMID: 1697912
  26. A mutant of human immunodeficiency virus with reduced RNA packaging and abnormal particle morphology.
    J Virol. 1990 Oct;64(10):5230-4 PMID: 2204725
  27. Construction and use of a human immunodeficiency virus vector for analysis of virus infectivity.
    J Virol. 1990 Nov;64(11):5270-6 PMID: 2214018
  28. Transport and assembly of gag proteins into Moloney murine leukemia virus.
    J Virol. 1990 Nov;64(11):5306-16 PMID: 1698996
  29. Binding of human immunodeficiency virus type 1 (HIV-1) RNA to recombinant HIV-1 gag polyprotein.
    J Virol. 1991 Jun;65(6):3203-12 PMID: 2033671
  30. Analysis of HIV particle formation using transient expression of subviral constructs in mammalian cells.
    Virology. 1992 Jan;186(1):25-39 PMID: 1727601
  31. Crystallization of beta-galactosidase from Escherichia coli.
    J Mol Biol. 1992 Feb 20;223(4):1177-82 PMID: 1538395
  32. A new technique for the assay of infectivity of human adenovirus 5 DNA.
    Virology. 1973 Apr;52(2):456-67 PMID: 4705382
  33. Selection for animal cells that express the Escherichia coli gene coding for xanthine-guanine phosphoribosyltransferase.
    Proc Natl Acad Sci U S A. 1981 Apr;78(4):2072-6 PMID: 7017722
  34. Nucleotide sequence of the AIDS virus, LAV.
    Cell. 1985 Jan;40(1):9-17 PMID: 2981635
  35. Complete nucleotide sequence of the AIDS virus, HTLV-III.
    Nature. 1985 Jan 24-30;313(6000):277-84 PMID: 2578615
  36. A deletion mutation in the 5' part of the pol gene of Moloney murine leukemia virus blocks proteolytic processing of the gag and pol polyproteins.
    J Virol. 1985 Mar;53(3):899-907 PMID: 3882995
  37. Replication-competent Moloney murine leukemia virus carrying a bacterial suppressor tRNA gene: selective cloning of proviral and flanking host sequences.
    Proc Natl Acad Sci U S A. 1985 Feb;82(4):1141-5 PMID: 3883352
  38. Murine leukemia virus maturation: protease region required for conversion from "immature" to "mature" core form and for virus infectivity.
    Virology. 1985 Sep;145(2):280-92 PMID: 2411050
  39. The trans-activator gene of HTLV-III is essential for virus replication.
    Nature. 1986 Mar 27-Apr 2;320(6060):367-71 PMID: 3007995
  40. Standardized and simplified nomenclature for proteins common to all retroviruses.
    J Virol. 1988 May;62(5):1808-9 PMID: 3357211
  41. The gag gene products of human immunodeficiency virus type 1: alignment within the gag open reading frame, identification of posttranslational modifications, and evidence for alternative gag precursors.
    J Virol. 1988 Nov;62(11):3993-4002 PMID: 3262776
  42. Conserved cysteine and histidine residues of the avian myeloblastosis virus nucleocapsid protein are essential for viral replication but are not "zinc-binding fingers".
    Proc Natl Acad Sci U S A. 1988 Oct;85(19):7094-8 PMID: 2845395
  43. Gag proteins of the highly replicative MN strain of human immunodeficiency virus type 1: posttranslational modifications, proteolytic processings, and complete amino acid sequences.
    J Virol. 1992 Apr;66(4):1856-65 PMID: 1548743
  44. The structure of trp RNA-binding attenuation protein.
    Nature. 1995 Apr 20;374(6524):693-700 PMID: 7715723
  45. The spacer peptide between human immunodeficiency virus capsid and nucleocapsid proteins is essential for ordered assembly and viral infectivity.
    J Virol. 1995 Jun;69(6):3407-19 PMID: 7745687
  46. Nucleocapsid protein effects on the specificity of retrovirus RNA encapsidation.
    J Virol. 1995 Sep;69(9):5716-22 PMID: 7637017
  47. Characterization of deletion mutations in the capsid region of human immunodeficiency virus type 1 that affect particle formation and Gag-Pol precursor incorporation.
    J Virol. 1995 Oct;69(10):6106-14 PMID: 7666514
  48. Retroviral nucleocapsid domains mediate the specific recognition of genomic viral RNAs by chimeric Gag polyproteins during RNA packaging in vivo.
    J Virol. 1995 Oct;69(10):6445-56 PMID: 7666546
  49. Self-assembly in vitro of purified CA-NC proteins from Rous sarcoma virus and human immunodeficiency virus type 1.
    J Virol. 1995 Oct;69(10):6487-97 PMID: 7666550
  50. p6Gag is required for particle production from full-length human immunodeficiency virus type 1 molecular clones expressing protease.
    J Virol. 1995 Nov;69(11):6810-8 PMID: 7474093
  51. RNA packaging signal of human immunodeficiency virus type 1.
    Virology. 1992 Jun;188(2):590-9 PMID: 1585635
  52. The human immunodeficiency virus type 1 packaging signal and major splice donor region have a conserved stable secondary structure.
    J Virol. 1992 Jul;66(7):4144-53 PMID: 1602537
  53. The nonmyristylated Pr160gag-pol polyprotein of human immunodeficiency virus type 1 interacts with Pr55gag and is incorporated into viruslike particles.
    J Virol. 1992 Nov;66(11):6304-13 PMID: 1383561
  54. Avian retroviral RNA encapsidation: reexamination of functional 5' RNA sequences and the role of nucleocapsid Cys-His motifs.
    J Virol. 1993 Jan;67(1):178-88 PMID: 8380070
  55. Distinct signals in human immunodeficiency virus type 1 Pr55 necessary for RNA binding and particle formation.
    J Gen Virol. 1992 Dec;73 ( Pt 12):3079-86 PMID: 1469349
  56. MtrB from Bacillus subtilis binds specifically to trp leader RNA in a tryptophan-dependent manner.
    Proc Natl Acad Sci U S A. 1993 Jan 1;90(1):128-32 PMID: 8419914
  57. Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains.
    J Mol Biol. 1993 Jan 20;229(2):382-97 PMID: 8429553
  58. Requirements for incorporation of Pr160gag-pol from human immunodeficiency virus type 1 into virus-like particles.
    J Virol. 1993 Apr;67(4):2266-75 PMID: 8445731
  59. Basic amino acids flanking the zinc finger of Moloney murine leukemia virus nucleocapsid protein NCp10 are critical for virus infectivity.
    J Virol. 1993 May;67(5):2537-45 PMID: 8474159
  60. Assembly-defective point mutants of the human immunodeficiency virus type 1 Gag precursor phenotypically expressed in recombinant baculovirus-infected cells.
    J Virol. 1993 May;67(5):2787-98 PMID: 8474175
  61. Mutations in the protease gene of human immunodeficiency virus type 1 affect release and stability of virus particles.
    Virology. 1993 Jun;194(2):843-50 PMID: 8503189
  62. Nucleocapsid zinc fingers detected in retroviruses: EXAFS studies of intact viruses and the solution-state structure of the nucleocapsid protein from HIV-1.
    Protein Sci. 1992 May;1(5):563-74 PMID: 1304355
  63. Identification of a binding site for the human immunodeficiency virus type 1 nucleocapsid protein.
    Proc Natl Acad Sci U S A. 1993 Jun 1;90(11):5219-23 PMID: 8506369
  64. Assembly, processing, and infectivity of human immunodeficiency virus type 1 gag mutants.
    J Virol. 1993 Jul;67(7):4264-73 PMID: 7685414
  65. Characterization of a small (25-kilodalton) derivative of the Rous sarcoma virus Gag protein competent for particle release.
    J Virol. 1993 Sep;67(9):5550-61 PMID: 8394460
  66. Mapping of functionally important residues of a cysteine-histidine box in the human immunodeficiency virus type 1 nucleocapsid protein.
    J Virol. 1993 Oct;67(10):6159-69 PMID: 8371356
  67. Functional chimeras of the Rous sarcoma virus and human immunodeficiency virus gag proteins.
    J Virol. 1993 Nov;67(11):6487-98 PMID: 8411352
  68. Conditional infectivity of a human immunodeficiency virus matrix domain deletion mutant.
    J Virol. 1993 Dec;67(12):7067-76 PMID: 7693966
  69. Specific binding of human immunodeficiency virus type 1 gag polyprotein and nucleocapsid protein to viral RNAs detected by RNA mobility shift assays.
    J Virol. 1993 Dec;67(12):7190-200 PMID: 8230441
  70. Conformational behaviour of the active and inactive forms of the nucleocapsid NCp7 of HIV-1 studied by 1H NMR.
    J Mol Biol. 1994 Jan 7;235(1):287-301 PMID: 8289249
  71. Identification of human immunodeficiency virus type 1 Gag protein domains essential to membrane binding and particle assembly.
    J Virol. 1994 May;68(5):3232-42 PMID: 8151785
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1997-09-00
Pages
6765-76
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC191957
Subset
IM
Grants
NCI NIH HHS · 2RO1CA47088-07 · United States
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